MirGeneDB 3.0
MirGeneDB ID

Tgu-Mir-551-P2

Family name MIR-551 (all species)
Species Zebra finch (Taeniopygia guttata)
MiRBase ID
Paralogues
Orthologues Aca-Mir-551-P2  Ami-Mir-551-P2  Bta-Mir-551-P2  Cfa-Mir-551-P2  Cja-Mir-551-P2  Cli-Mir-551-P2  Cmi-Mir-551-P2  Cpi-Mir-551-P2  Cpo-Mir-551-P2  Dno-Mir-551-P2  Dre-Mir-551-P2  Eca-Mir-551-P2  Ete-Mir-551-P2  Gga-Mir-551-P2  Gja-Mir-551-P2  Gmo-Mir-551-P2  Hsa-Mir-551-P2  Laf-Mir-551-P2  Lch-Mir-551-P2  Loc-Mir-551-P2  Mal-Mir-551-P2  Mdo-Mir-551-P2  Mml-Mir-551-P2  Mmr-Mir-551-P2  Mmu-Mir-551-P2  Mun-Mir-551-P2  Neu-Mir-551-P2  Oan-Mir-551-P2  Ocu-Mir-551-P2  Pab-Mir-551-P2  Pbv-Mir-551-P2  Rno-Mir-551-P2  Sha-Mir-551-P2  Spt-Mir-551-P2  Sto-Mir-551-P2  Xla-Mir-551-P2a  Xla-Mir-551-P2b  Xtr-Mir-551-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(TaeGut1_add)		 9: 22241121-22241181 [-] UCSC Ensembl
Seed CGACCCA
Precursor
(pre-Mir +30nt flank)		 
AGACUCUGCCCAAGCAGCCCCAUGGCUCCAGAAAUCAAGGGUGGGUAAGACCUGGUGAGCAAACUCUAAGGCGACCCAUACUUGGUUUCAGGGGCUGUGGGCGCUCGUCUCCGCCGGGUCC
Get precursor sequence
Structure
        10          20        30        40        50        60 
AGACUCUGCCCAAGCAGC--|          A         GG     AAGA   GGUGAGC 
                    CCCAUGGCUCC GAAAUCAAG  UGGGU    CCU       \
                    GGGUGUCGGGG CUUUGGUUC  ACCCA    GGA       A
CCUGGGCCGCCUCUGCUCGC^          A         AU     GC--   AUCUCAA 
 .       110       100        90        80          70
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
- +
Fe Fe Fe Fe Ma Ma Ma Ma
Star sequence

Tgu-Mir-551-P2_5p*
mirBase accessionNone
Sequence 
0- GAAAUCAAGGGUGGGUAAGACCU -23
Get sequence
Mature sequence

Tgu-Mir-551-P2_3p
mirBase accessionNone
Sequence 
40- GCGACCCAUACUUGGUUUCAG -61
Get sequence