MirGeneDB 3.0
MirGeneDB ID

Bta-Mir-551-P2

Family name MIR-551 (all species)
Species Cow (Bos taurus)
MiRBase ID bta-mir-551b
Paralogues
Orthologues Aca-Mir-551-P2  Ami-Mir-551-P2  Cfa-Mir-551-P2  Cja-Mir-551-P2  Cli-Mir-551-P2  Cmi-Mir-551-P2  Cpi-Mir-551-P2  Cpo-Mir-551-P2  Dno-Mir-551-P2  Dre-Mir-551-P2  Eca-Mir-551-P2  Ete-Mir-551-P2  Gga-Mir-551-P2  Gja-Mir-551-P2  Gmo-Mir-551-P2  Hsa-Mir-551-P2  Laf-Mir-551-P2  Lch-Mir-551-P2  Loc-Mir-551-P2  Mal-Mir-551-P2  Mdo-Mir-551-P2  Mml-Mir-551-P2  Mmr-Mir-551-P2  Mmu-Mir-551-P2  Mun-Mir-551-P2  Neu-Mir-551-P2  Oan-Mir-551-P2  Ocu-Mir-551-P2  Pab-Mir-551-P2  Pbv-Mir-551-P2  Rno-Mir-551-P2  Sha-Mir-551-P2  Spt-Mir-551-P2  Sto-Mir-551-P2  Tgu-Mir-551-P2  Xla-Mir-551-P2a  Xla-Mir-551-P2b  Xtr-Mir-551-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037328.1: 98873855-98873914 [-] UCSC Ensembl
Seed CGACCCA
Precursor
(pre-Mir +30nt flank)		 
AGAUCCGCCAGAGAAGUUCUCCUGGCCUAAGAAAUCAAGCGUGGGUGAGACCUGGUGCAGAACAGGAAGGCGACCCAUACUUGGUUUCAGAGGCUGUGAGAAUACCUACAGUCUAGAGAG
Get precursor sequence
Structure
        10          20        30        40        50        60
AGAUCCGCCAGAGAAGU--|   C      AA         CG     GAGA   GGUGCA 
                   UCUC UGGCCU  GAAAUCAAG  UGGGU    CCU      G
                   AGAG GUCGGA  CUUUGGUUC  ACCCA    GGA      A
GAGAGAUCUGACAUCCAUA^   U      GA         AU     GC--   AGGACA 
.       110       100        90        80          70
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Star sequence

Bta-Mir-551-P2_5p*
mirBase accessionNone
Sequence 
0- GAAAUCAAGCGUGGGUGAGACCU -23
Get sequence
Mature sequence

Bta-Mir-551-P2_3p
mirBase accessionMIMAT0009348
Sequence 
39- GCGACCCAUACUUGGUUUCAG -60
Get sequence
Proposed targets TargetScanVert: bta-miR-551b