MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-1298

Family name MIR-1298 (all species)
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-1298
Paralogues
Orthologues Bta-Mir-1298  Cfa-Mir-1298  Cja-Mir-1298  Cpo-Mir-1298  Eca-Mir-1298  Ete-Mir-1298  Hsa-Mir-1298  Laf-Mir-1298  Mml-Mir-1298  Mmr-Mir-1298  Mmu-Mir-1298  Ocu-Mir-1298  Pab-Mir-1298 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rn6)		 chrX: 118190252-118190325 [+] UCSC Ensembl
Seed UCAUUCG
Precursor
(pre-Mir +30nt flank)		 
AGAAGUGUUGGAGAGAUGAGGGGUUAAGAGUUCAUUCGGCUGUCCAGAUGUAUCCAAGUACCCUGUUAUUUGGCAAUAAAUACAUCUGGGCAACUGAUUGAACUUUUCGCUUCUCUUGACUCAACUGGAGCACC
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Structure
        10          20        30        40        50        60      
AGAAGUGUUGGAGAGAU--|      U         U    C            UCCAAGUACCCUG 
                   GAGGGGU AAGAGUUCA UCGG UGUCCAGAUGUA             U
                   CUCUUCG UUUUCAAGU AGUC ACGGGUCUACAU             U
CCACGAGGUCAACUCAGUU^      C         U    A            AAAUAACGGUUUA 
  130       120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
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Mature sequence

Rno-Mir-1298_5p
mirBase accessionMIMAT0025060
Sequence 
0- UUCAUUCGGCUGUCCAGAUGUA -22
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Proposed targets TargetScanVert: rno-miR-1298
miRDB: MIMAT0025060
Star sequence

Rno-Mir-1298_3p*
mirBase accessionNone
Sequence 
52- CAUCUGGGCAACUGAUUGAACU -74
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