MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-1298

Family name MIR-1298 (all species)
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Bta-Mir-1298  Cfa-Mir-1298  Cja-Mir-1298  Cpo-Mir-1298  Eca-Mir-1298  Ete-Mir-1298  Hsa-Mir-1298  Laf-Mir-1298  Mml-Mir-1298  Mmr-Mir-1298  Mmu-Mir-1298  Ocu-Mir-1298  Rno-Mir-1298 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054702.2: 120561328-120561403 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-1298)		 Mir-1298 CM054702.2: 120561328-120561403 [+] UCSC Ensembl
Mir-1911 CM054702.2: 120605512-120605570 [+] UCSC Ensembl
Seed UCAUUCG
Precursor
(pre-Mir +30nt flank)		 
AGAGCUGUUGGAGAGACGAGGAGUUAAGAGUUCAUUCGGCUGUCCAGAUGUAUCCAAGUACCCUGUGUUAUUUGGCAAUAAAUACAUCUGGGCAACUGACUGAACUUUUCACUUUUCAAGAUUCAGCUGGAACCCU
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Structure
        10          20        30        40        50        60       
AGAGCUGUUGGAGAGAC--|      U         U    C            UCCAAGUACCCUGU 
                   GAGGAGU AAGAGUUCA UCGG UGUCCAGAUGUA              G
                   CUUUUCA UUUUCAAGU AGUC ACGGGUCUACAU              U
UCCCAAGGUCGACUUAGAA^      C         C    A            AAAUAACGGUUUAU 
    130       120       110       100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Br Li Li
Mature sequence

Pab-Mir-1298_5p
mirBase accessionNone
Sequence 
0- UUCAUUCGGCUGUCCAGAUGUA -22
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Star sequence

Pab-Mir-1298_3p*
mirBase accessionNone
Sequence 
54- CAUCUGGGCAACUGACUGAACU -76
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