MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-1298

Family name MIR-1298 (all species)
Species Dog (Canis familiaris)
MiRBase ID
Paralogues
Orthologues Bta-Mir-1298  Cja-Mir-1298  Cpo-Mir-1298  Eca-Mir-1298  Ete-Mir-1298  Hsa-Mir-1298  Laf-Mir-1298  Mml-Mir-1298  Mmr-Mir-1298  Mmu-Mir-1298  Ocu-Mir-1298  Pab-Mir-1298  Rno-Mir-1298 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 chrX: 87468912-87468985 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-1298)		 Mir-1298 chrX: 87468912-87468985 [+] UCSC Ensembl
Mir-1911 chrX: 87505482-87505540 [+] UCSC Ensembl
Seed UCAUUCG
Precursor
(pre-Mir +30nt flank)		 
AGAGCUGUUGGAAAGAGGAGGAGUUAAGAGUUCAUUCGGCUGUCCAGAUGUAUCCAAGUACCCUGUUAUUUGGCAAUAAAUACAUCUGGGCAACUGAUUGAACUUUUCGCUUUUCACGACUCUACUGGAACCUC
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Structure
        10          20        30        40        50        60      
AGAGCUGUUGGAAAGAG--|      U         U    C            UCCAAGUACCCUG 
                   GAGGAGU AAGAGUUCA UCGG UGUCCAGAUGUA             U
                   CUUUUCG UUUUCAAGU AGUC ACGGGUCUACAU             U
CUCCAAGGUCAUCUCAGCA^      C         U    A            AAAUAACGGUUUA 
  130       120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-1298_5p
mirBase accessionNone
Sequence 
0- UUCAUUCGGCUGUCCAGAUGUA -22
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Star sequence

Cfa-Mir-1298_3p*
mirBase accessionNone
Sequence 
52- CAUCUGGGCAACUGAUUGAACU -74
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