MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-1911

Family name MIR-1911 (all species)
Species Dog (Canis familiaris)
MiRBase ID
Paralogues
Orthologues Bta-Mir-1911  Cja-Mir-1911  Eca-Mir-1911  Hsa-Mir-1911  Mml-Mir-1911  Mmr-Mir-1911  Ocu-Mir-1911  Pab-Mir-1911 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 chrX: 87505482-87505540 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-1911)		 Mir-1298 chrX: 87468912-87468985 [+] UCSC Ensembl
Mir-1911 chrX: 87505482-87505540 [+] UCSC Ensembl
Seed GAGUACC
Precursor
(pre-Mir +30nt flank)		 
GGUAUCCAUCAUCAUUUGCUGGGCAUCUGCUGAGUACCGCCAUGUCUGUUGGGCGUCCACUAUCUCCCACCAGGCAUUGUGGUCUCUGCUGAUGCUCUGCCAUUUCACCACCAUGAGAA
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Structure
        10          20        30        40        50         
GGUAUCCAUCAUCAUUU--| U       U  U   U     C       U    CGUCC 
                   GC GGGCAUC GC GAG ACCGC AUGUCUG UGGG     A
                   CG CUCGUAG CG CUC UGGUG UACGGAC ACCC     C
AAGAGUACCACCACUUUAC^ U       U  U   -     U       C    UCUAU 
       110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-1911_5p
mirBase accessionNone
Sequence 
0- UGAGUACCGCCAUGUCUGUUGGG -23
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Star sequence

Cfa-Mir-1911_3p*
mirBase accessionNone
Sequence 
37- CACCAGGCAUUGUGGUCUCUGC -59
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