MirGeneDB 3.0
MirGeneDB ID

Bta-Mir-1911

Family name MIR-1911 (all species)
Species Cow (Bos taurus)
MiRBase ID
Paralogues
Orthologues Cfa-Mir-1911  Cja-Mir-1911  Eca-Mir-1911  Hsa-Mir-1911  Mml-Mir-1911  Mmr-Mir-1911  Ocu-Mir-1911  Pab-Mir-1911 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037357.1: 63096211-63096269 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-1911)		 Mir-1298 NC_037357.1: 63075823-63075896 [+] UCSC Ensembl
Mir-1911 NC_037357.1: 63096211-63096269 [+] UCSC Ensembl
Seed GAGUACC
Precursor
(pre-Mir +30nt flank)		 
AGUAUCCAUCAUCAUAUGCUGGGCAUCUGCUGAGUACCGCCAUGUCUGUUGGGAAUCCACAAUCUCCCACCAGGCAUUGUGGUCUCUGCUGAUGCUCUGCCAUUUCAUCACCAGUGCCU
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Structure
        10          20        30        40        50         
AGUAUCCAUCAUCAUAU--| U       U  U   U     C       U    AAUCC 
                   GC GGGCAUC GC GAG ACCGC AUGUCUG UGGG     A
                   CG CUCGUAG CG CUC UGGUG UACGGAC ACCC     C
UCCGUGACCACUACUUUAC^ U       U  U   -     U       C    UCUAA 
       110       100        90         80        70        60
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-1911_5p
mirBase accessionNone
Sequence 
0- UGAGUACCGCCAUGUCUGUUGGG -23
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Star sequence

Bta-Mir-1911_3p*
mirBase accessionNone
Sequence 
37- CACCAGGCAUUGUGGUCUCUGC -59
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