MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-383

Family name MIR-383 (all species)
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-383
Paralogues
Orthologues Aca-Mir-383-v1  Ami-Mir-383-v1  Bta-Mir-383-v1  Cfa-Mir-383-v1  Cja-Mir-383-v1  Cli-Mir-383-v1  Cpi-Mir-383-v1  Cpo-Mir-383-v1  Dno-Mir-383-v1  Eca-Mir-383-v1  Ete-Mir-383-v1  Gga-Mir-383-v1  Gja-Mir-383-v1  Hsa-Mir-383-v1  Laf-Mir-383-v1  Mdo-Mir-383-v1  Mml-Mir-383-v1  Mmr-Mir-383-v1  Mmu-Mir-383-v1  Mun-Mir-383  Oan-Mir-383-v1  Ocu-Mir-383-v1  Pab-Mir-383-v1  Pbv-Mir-383-v1  Sha-Mir-383-v1  Spt-Mir-383  Tgu-Mir-383-v1  Xtr-Mir-383-v1 
Node of Origin (locus) Tetrapoda
Node of Origin (family) Tetrapoda
Genome context
(rn6)		 chr16: 57519680-57519741 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-383-v1)		 Mir-383-v2 chr16: 57519679-57519741 [+] UCSC Ensembl
Mir-383-v1 chr16: 57519680-57519741 [+] UCSC Ensembl
Variant

Rno-Mir-383-v1
Seed GAUCAGA
Precursor
(pre-Mir +30nt flank)		 
CCUCCAGAAACUCCACGUCACCUGCUCCUCAGAUCAGAAGGUGACUGUGGCUUUGGGUGGAUAUUAAUCAGCCACAGCACUGCCUGGUCAGAAAGAGCAAGUGUCCUAGCCUUUUACCUCAU
Get precursor sequence
Structure
        10         20         30        40        50        60 
CCUCCAGAAACUCCACGU-   C     C-| A      AA    A        UUGGGUGG 
                   CAC UGCUC  UC GAUCAG  GGUG CUGUGGCU        \
                   GUG ACGAG  AG CUGGUC  UCAC GACACCGA        A
UACUCCAUUUUCCGAUCCU   A     AA^ A      CG    -        CUAAUUAU 
120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
Dr Dr Ad Bi Bi Bi Bi Br Br Br Br Ce Ce Ce Ce Co Co Co Co Du Du Du Du Fa He He He Hi Hi Il Il Je Je Ki Ki Ki Ki Ki La Li Li Li Li Li Li Lu Me Me Mu Ov Pa Pa Pa Sk Sm So So So So Sp St St St St Te Te Th Ut Wh
Mature sequence

Rno-Mir-383-v1_5p
mirBase accessionMIMAT0003114
Sequence 
0- AGAUCAGAAGGUGACUGUGGCU -22
Get sequence
Proposed targets microrna.org: MIMAT0003114
TargetScanVert: rno-miR-383-5p
miRDB: MIMAT0003114
Star sequence

Rno-Mir-383-v1_3p*
mirBase accessionMIMAT0017197
Sequence 
41- CCACAGCACUGCCUGGUCAGA -62
Get sequence
Proposed targets TargetScanVert: rno-miR-383-3p
miRDB: MIMAT0017197
Variant

Rno-Mir-383-v2
Seed AGAUCAG
Precursor
(pre-Mir +30nt flank)		 
GCCUCCAGAAACUCCACGUCACCUGCUCCUCAGAUCAGAAGGUGACUGUGGCUUUGGGUGGAUAUUAAUCAGCCACAGCACUGCCUGGUCAGAAAGAGCAAGUGUCCUAGCCUUUUACCUCAU
Get precursor sequence
Structure
        10        20         30        40        50        60  
GCCUCCAGAAACUCCACGU   C     C-| A      AA    A        UUGGGUGG 
                   CAC UGCUC  UC GAUCAG  GGUG CUGUGGCU        \
                   GUG ACGAG  AG CUGGUC  UCAC GACACCGA        A
UACUCCAUUUUCCGAUCCU   A     AA^ A      CG    -        CUAAUUAU 
 120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsNo
Tissue expression
- +
Dr Dr Ad Bi Bi Bi Bi Br Br Br Br Ce Ce Ce Ce Co Co Co Co Du Du Du Du Fa He He He Hi Hi Il Il Je Je Ki Ki Ki Ki Ki La Li Li Li Li Li Li Lu Me Me Mu Ov Pa Pa Pa Sk Sm So So So So Sp St St St St Te Te Th Ut Wh
Mature sequence

Rno-Mir-383-v2_5p
mirBase accessionMIMAT0003114
Sequence 
0- CAGAUCAGAAGGUGACUGUGGCU -23
Get sequence
Proposed targets microrna.org: MIMAT0003114
TargetScanVert: rno-miR-383-5p
miRDB: MIMAT0003114
Star sequence

Rno-Mir-383-v2_3p*
mirBase accessionMIMAT0017197
Sequence 
42- CCACAGCACUGCCUGGUCAGA -63
Get sequence
Proposed targets TargetScanVert: rno-miR-383-3p
miRDB: MIMAT0017197