MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-383

Family name MIR-383 (all species)
Species Horse (Equus caballus)
MiRBase ID eca-mir-383
Paralogues
Orthologues Aca-Mir-383-v1  Ami-Mir-383-v1  Bta-Mir-383-v1  Cfa-Mir-383-v1  Cja-Mir-383-v1  Cli-Mir-383-v1  Cpi-Mir-383-v1  Cpo-Mir-383-v1  Dno-Mir-383-v1  Ete-Mir-383-v1  Gga-Mir-383-v1  Gja-Mir-383-v1  Hsa-Mir-383-v1  Laf-Mir-383-v1  Mdo-Mir-383-v1  Mml-Mir-383-v1  Mmr-Mir-383-v1  Mmu-Mir-383-v1  Mun-Mir-383  Oan-Mir-383-v1  Ocu-Mir-383-v1  Pab-Mir-383-v1  Pbv-Mir-383-v1  Rno-Mir-383-v1  Sha-Mir-383-v1  Spt-Mir-383  Tgu-Mir-383-v1  Xtr-Mir-383-v1 
Node of Origin (locus) Tetrapoda
Node of Origin (family) Tetrapoda
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009174.1: 18220082-18220143 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-383-v1)		 Mir-383-v2 CM009174.1: 18220081-18220144 [-] UCSC Ensembl
Mir-383-v1 CM009174.1: 18220082-18220143 [-] UCSC Ensembl
Variant

Eca-Mir-383-v1
Seed GAUCAGA
Precursor
(pre-Mir +30nt flank)		 
ACUUCAGAAUCUCCACGUCACCUGCUCCUCAGAUCAGAAGGUGAUUGUGGCUUUGGGUGGAUAUUAAUCAGCCACAGCACUGCCUGGUCAGAAAGAGCAAGUGUCCUAGCCUUUUACCUCAU
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Structure
        10         20         30        40        50        60 
ACUUCAGAAUCUCCACGU-   C     C-| A      AA    A        UUGGGUGG 
                   CAC UGCUC  UC GAUCAG  GGUG UUGUGGCU        \
                   GUG ACGAG  AG CUGGUC  UCAC GACACCGA        A
UACUCCAUUUUCCGAUCCU   A     AA^ A      CG    -        CUAAUUAU 
120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Mature sequence

Eca-Mir-383-v1_5p
mirBase accessionMIMAT0013185
Sequence 
0- AGAUCAGAAGGUGAUUGUGGCU -22
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Star sequence

Eca-Mir-383-v1_3p*
mirBase accessionNone
Sequence 
41- CCACAGCACUGCCUGGUCAGA -62
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Variant

Eca-Mir-383-v2
Seed AGAUCAG
Precursor
(pre-Mir +30nt flank)		 
CACUUCAGAAUCUCCACGUCACCUGCUCCUCAGAUCAGAAGGUGAUUGUGGCUUUGGGUGGAUAUUAAUCAGCCACAGCACUGCCUGGUCAGAAAGAGCAAGUGUCCUAGCCUUUUACCUCAUG
Get precursor sequence
Structure
        10         20         30        40        50        60  
CACUUCAGAAUCUCCACGU-   C     C-| A      AA    A        UUGGGUGG 
                    CAC UGCUC  UC GAUCAG  GGUG UUGUGGCU        \
                    GUG ACGAG  AG CUGGUC  UCAC GACACCGA        A
GUACUCCAUUUUCCGAUCCU   A     AA^ A      CG    -        CUAAUUAU 
  120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsNo
Tissue expression
- +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Mature sequence

Eca-Mir-383-v2_5p
mirBase accessionMIMAT0013185
Sequence 
0- CAGAUCAGAAGGUGAUUGUGGCU -23
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Star sequence

Eca-Mir-383-v2_3p*
mirBase accessionNone
Sequence 
42- CCACAGCACUGCCUGGUCAGAA -64
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