MirGeneDB 2.1

MirGeneDB ID

Mdo-Mir-383-v1

Family name MIR-383 (all species)
Seed GAUCAGA
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-383
Paralogues Mdo-Mir-383-v2 
Orthologues Aca-Mir-383-v1  Ami-Mir-383-v1  Bta-Mir-383-v1  Cfa-Mir-383-v1  Cli-Mir-383-v1  Cpi-Mir-383-v1  Cpo-Mir-383-v1  Dno-Mir-383-v1  Ete-Mir-383-v1  Gga-Mir-383-v1  Gja-Mir-383-v1  Hsa-Mir-383-v1  Mml-Mir-383-v1  Mmu-Mir-383-v1  Mun-Mir-383  Oan-Mir-383-v1  Ocu-Mir-383-v1  Pbv-Mir-383-v1  Rno-Mir-383-v1  Sha-Mir-383-v1  Spt-Mir-383  Tgu-Mir-383-v1  Xtr-Mir-383-v1 
Node of Origin (locus) Tetrapoda
Node of Origin (family) Tetrapoda
Genome context
(monDom5_add)
5: 17427577-17427638 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-383-v1)
Mir-383-v2 5: 17427576-17427638 [+] UCSC Ensembl
Mir-383-v1 5: 17427577-17427638 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACAACAGAAGCUUUAAGUCACCUGCUCCUCAGAUCAGAAGGUGAUUGUGGCUUUCGGUAGACAUGGAACAGCCACAUCACUGGCUGGUCAGAAAGAGCAAGUGUCCUAGCCUUUGGCCUCGU
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Structure
        10         20         30        40        50        60 
ACAACAGAAGCUUUAAGU-   C     C-| A      AA      U      UUCGGUAG 
                   CAC UGCUC  UC GAUCAG  GGUGAU GUGGCU        \
                   GUG ACGAG  AG CUGGUC  UCACUA CACCGA        A
UGCUCCGGUUUCCGAUCCU   A     AA^ A      GG      -      CAAGGUAC 
120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Br Ce He Ki Te
Mature sequence

Mdo-Mir-383-v1_5p

mirBase accessionMIMAT0004139
Sequence
0- AGAUCAGAAGGUGAUUGUGGCU -22
Get sequence
Proposed targets TargetScanVert: mdo-miR-383-5p
Star sequence

Mdo-Mir-383-v1_3p*

mirBase accessionMIMAT0026684
Sequence
41- CCACAUCACUGGCUGGUCAGA -62
Get sequence
Proposed targets TargetScanVert: mdo-miR-383-3p