MirGeneDB 3.0
MirGeneDB ID

Gga-Mir-383

Family name MIR-383 (all species)
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-383
Paralogues
Orthologues Aca-Mir-383-v1  Ami-Mir-383-v1  Bta-Mir-383-v1  Cfa-Mir-383-v1  Cja-Mir-383-v1  Cli-Mir-383-v1  Cpi-Mir-383-v1  Cpo-Mir-383-v1  Dno-Mir-383-v1  Eca-Mir-383-v1  Ete-Mir-383-v1  Gja-Mir-383-v1  Hsa-Mir-383-v1  Laf-Mir-383-v1  Mdo-Mir-383-v1  Mml-Mir-383-v1  Mmr-Mir-383-v1  Mmu-Mir-383-v1  Mun-Mir-383  Oan-Mir-383-v1  Ocu-Mir-383-v1  Pab-Mir-383-v1  Pbv-Mir-383-v1  Rno-Mir-383-v1  Sha-Mir-383-v1  Spt-Mir-383  Tgu-Mir-383-v1  Xtr-Mir-383-v1 
Node of Origin (locus) Tetrapoda
Node of Origin (family) Tetrapoda
Genome context
(Gallus_gallus.GRCg6a)		 4: 63986776-63986837 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-383-v1)		 Mir-383-v2 4: 63986775-63986837 [+] UCSC Ensembl
Mir-383-v1 4: 63986776-63986837 [+] UCSC Ensembl
Variant

Gga-Mir-383-v1
Seed GAUCAGA
Precursor
(pre-Mir +30nt flank)		 
GGAAGAGAAUCACCAAGUCACCUGCUCCUCAGAUCAGAAGGUGAUUGUGGCUUUGGGUAAAUAUUGAGCAGCCACAGCACUGCCUGGUCAGAAAGAGCAAGUGUACUAGCCUUUUACUUCCU
Get precursor sequence
Structure
        10         20         30        40        50        60 
GGAAGAGAAUCACCAAGU-   C     C-| A      AA    A        UUGGGUAA 
                   CAC UGCUC  UC GAUCAG  GGUG UUGUGGCU        \
                   GUG ACGAG  AG CUGGUC  UCAC GACACCGA        A
UCCUUCAUUUUCCGAUCAU   A     AA^ A      CG    -        CGAGUUAU 
120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Mature sequence

Gga-Mir-383-v1_5p
mirBase accessionMIMAT0003363
Sequence 
0- AGAUCAGAAGGUGAUUGUGGCU -22
Get sequence
Proposed targets TargetScanVert: gga-miR-383-5p
miRDB: MIMAT0003363
Star sequence

Gga-Mir-383-v1_3p*
mirBase accessionMIMAT0026631
Sequence 
41- CCACAGCACUGCCUGGUCAGA -62
Get sequence
Proposed targets TargetScanVert: gga-miR-383-3p
miRDB: MIMAT0026631
Variant

Gga-Mir-383-v2
Seed AGAUCAG
Precursor
(pre-Mir +30nt flank)		 
UGGAAGAGAAUCACCAAGUCACCUGCUCCUCAGAUCAGAAGGUGAUUGUGGCUUUGGGUAAAUAUUGAGCAGCCACAGCACUGCCUGGUCAGAAAGAGCAAGUGUACUAGCCUUUUACUUCCU
Get precursor sequence
Structure
        10        20         30        40        50        60  
UGGAAGAGAAUCACCAAGU   C     C-| A      AA    A        UUGGGUAA 
                   CAC UGCUC  UC GAUCAG  GGUG UUGUGGCU        \
                   GUG ACGAG  AG CUGGUC  UCAC GACACCGA        A
UCCUUCAUUUUCCGAUCAU   A     AA^ A      CG    -        CGAGUUAU 
 120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsNo
Tissue expression
- +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Mature sequence

Gga-Mir-383-v2_5p
mirBase accessionMIMAT0003363
Sequence 
0- CAGAUCAGAAGGUGAUUGUGGCU -23
Get sequence
Proposed targets TargetScanVert: gga-miR-383-5p
miRDB: MIMAT0003363
Star sequence

Gga-Mir-383-v2_3p*
mirBase accessionMIMAT0026631
Sequence 
42- CCACAGCACUGCCUGGUCAGA -63
Get sequence
Proposed targets TargetScanVert: gga-miR-383-3p
miRDB: MIMAT0026631