| MirGeneDB ID | Rno-Mir-744 |
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| Family name |
MIR-744 (all species) |
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| Species |
Norway rat (Rattus norvegicus) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Bta-Mir-744
Cfa-Mir-744
Cja-Mir-744
Cpo-Mir-744
Dno-Mir-744
Eca-Mir-744
Ete-Mir-744
Hsa-Mir-744
Laf-Mir-744
Mml-Mir-744
Mmr-Mir-744
Mmu-Mir-744
Ocu-Mir-744
Pab-Mir-744
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(rn6) |
chr10: 52244131-52244208 [-]
UCSC
Ensembl
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| Seed |
GCGGGGC |
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Precursor
(pre-Mir +30nt flank) |
GAGGAAGAAGCAGCACUGGGCUGGGCAAGGUGCGGGGCUAGGGCUAACAGCAGUCUUACUGAGGGUCUCCUGGAGACCACACACAUGCUGUUACCACUAACCUCAACCUUACUCCGUCCUGACCGGCUCGGCUUCUCU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GAGGAAGAAGCAGCACU--| U C GC C - C GUCUUACUGAGGGUCU
GGGC GGG AAGGU GGGG UAG GG UAACAGCA \
CCUG CUC UUCCA CUCC AUC CC AUUGUCGU C
UCUCUUCGGCUCGGCCAGU^ C A A- A A - ACACACACCAGAGGUC
130 120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| Comment | Although the 3' uridine is templated the 3' DcRNA reads when present suggest that this is a Group 2 miRNA. |
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| 3' NTU |
Yes
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Dr |
Dr |
Ad |
Bi |
Bi |
Bi |
Bi |
Br |
Br |
Br |
Br |
Ce |
Ce |
Ce |
Ce |
Co |
Co |
Co |
Co |
Du |
Du |
Du |
Du |
Fa |
He |
He |
He |
Hi |
Hi |
Il |
Il |
Je |
Je |
Ki |
Ki |
Ki |
Ki |
Ki |
La |
Li |
Li |
Li |
Li |
Li |
Li |
Lu |
Me |
Me |
Mu |
Ov |
Pa |
Pa |
Pa |
Sk |
Sm |
So |
So |
So |
So |
Sp |
St |
St |
St |
St |
Te |
Te |
Th |
Ut |
Wh |
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| Mature sequence |
Rno-Mir-744_5p |
| mirBase accession | None |
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| Sequence |
0- UGCGGGGCUAGGGCUAACAGCA -22
Get sequence
|
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| Star sequence |
Rno-Mir-744_3p* |
| mirBase accession | None |
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| Sequence |
57- CUGUUACCACUAACCUCAACC -78
Get sequence
|
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