MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-652

Family name MIR-652 (all species)
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-652
Paralogues
Orthologues Bta-Mir-652  Cfa-Mir-652  Cja-Mir-652  Cpo-Mir-652  Dno-Mir-652  Eca-Mir-652  Ete-Mir-652  Hsa-Mir-652  Laf-Mir-652  Mml-Mir-652  Mmr-Mir-652  Mmu-Mir-652  Ocu-Mir-652  Pab-Mir-652 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rn6)		 chrX: 114002544-114002604 [+] UCSC Ensembl
Seed AUGGCGC
Precursor
(pre-Mir +30nt flank)		 
AAGGGCCUCCAGGAAUGGCUAUGCACUGCACAACCCUAGGAGGGGGUGCCAUUCACAUAGACUAUAAUUGAAUGGCGCCACUAGGGUUGUGCAGUGUACAACCUACACAACUAUACGCGGC
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Structure
        10        20          30        40        50        60  
AAGGGCCUCCAGGAAUGGCUA--|                 GAGGG           CAUAGA 
                       UGCACUGCACAACCCUAG     GGUGCCAUUCA      \
                       AUGUGACGUGUUGGGAUC     CCGCGGUAAGU      C
CGGCGCAUAUCAACACAUCCAAC^                 A----           UAAUAU 
 .       110       100        90        80            70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
- +
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Star sequence

Rno-Mir-652_5p*
mirBase accessionMIMAT0017321
Sequence 
0- CAACCCUAGGAGGGGGUGCCAUUCA -25
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Proposed targets TargetScanVert: rno-miR-652-5p
miRDB: MIMAT0017321
Mature sequence

Rno-Mir-652_3p
mirBase accessionMIMAT0005342
Sequence 
40- AAUGGCGCCACUAGGGUUGUG -61
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Proposed targets microrna.org: MIMAT0005342
TargetScanVert: rno-miR-652-3p
miRDB: MIMAT0005342