MirGeneDB 3.0

MirGeneDB ID

Hsa-Mir-652

Family name MIR-652 (all species)
Species Human (Homo sapiens)
MiRBase ID hsa-mir-652
Paralogues
Orthologues Bta-Mir-652  Cfa-Mir-652  Cja-Mir-652  Cpo-Mir-652  Dno-Mir-652  Eca-Mir-652  Ete-Mir-652  Laf-Mir-652  Mml-Mir-652  Mmr-Mir-652  Mmu-Mir-652  Ocu-Mir-652  Pab-Mir-652  Rno-Mir-652 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(hg38)
chrX: 110055348-110055409 [+] UCSC Ensembl
Seed AUGGCGC
Precursor
(pre-Mir +30nt flank)
GCAGGGCCGCCACGAAUGGCUAUGCACUGCACAACCCUAGGAGAGGGUGCCAUUCACAUAGACUAUAAUUGAAUGGCGCCACUAGGGUUGUGCAGUGCACAACCUACACAACUGUACUCGGC
Get precursor sequence
Structure
        10         20        30        40        50        60   
GCAGGGCCGCCACGAAU-| CUA                  GAGAG         CACAUAGA 
                  GG   UGCACUGCACAACCCUAG     GGUGCCAUU        \
                  CC   ACGUGACGUGUUGGGAUC     CCGCGGUAA        C
CGGCUCAUGUCAACACAU^ AAC                  A----         GUUAAUAU 
120       110       100        90            80        70
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Star sequence

Hsa-Mir-652_5p*

mirBase accessionMIMAT0022709
Sequence
0- ACAACCCUAGGAGAGGGUGCCAUU -24
Get sequence
Proposed targets TargetScanVert: hsa-miR-652-5p
TargetMiner: hsa-miR-652-5p
miRDB: MIMAT0022709
Mature sequence

Hsa-Mir-652_3p

mirBase accessionMIMAT0003322
Sequence
41- AAUGGCGCCACUAGGGUUGUG -62
Get sequence
Proposed targets microrna.org: MIMAT0003322
TargetScanVert: hsa-miR-652-3p
TargetMiner: hsa-miR-652-3p
miRDB: MIMAT0003322