MirGeneDB 2.1
MirGeneDB ID

Rno-Mir-21

Family name MIR-21 (all species)
Seed AGCUUAU
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-21
Paralogues
Orthologues Aca-Mir-21  Ami-Mir-21  Bta-Mir-21  Cfa-Mir-21  Cli-Mir-21  Cmi-Mir-21  Cpi-Mir-21  Cpo-Mir-21  Dno-Mir-21  Dre-Mir-21-P1  Dre-Mir-21-P2  Ebu-Mir-21  Ete-Mir-21  Gga-Mir-21  Gja-Mir-21  Gmo-Mir-21-P1  Gmo-Mir-21-P2  Hsa-Mir-21  Lch-Mir-21  Loc-Mir-21  Mal-Mir-21-P1  Mal-Mir-21-P2  Mdo-Mir-21  Mml-Mir-21  Mmu-Mir-21  Mun-Mir-21  Oan-Mir-21  Ocu-Mir-21  Pbv-Mir-21  Pma-Mir-21  Sha-Mir-21  Spt-Mir-21  Sto-Mir-21  Tgu-Mir-21  Tni-Mir-21-P1  Tni-Mir-21-P2  Xla-Mir-21-P3  Xla-Mir-21-P4  Xtr-Mir-21 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(rn6)		 chr10: 73902225-73902284 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACAUCUGCAUGGCUGUACCACCUUGUCGGGUAGCUUAUCAGACUGAUGUUGACUGUUGAAUCUCAUGGCAACAGCAGUCGAUGGGCUGUCUGACAUUUUGGUAUCUUUCAUCUGACCAUC
Get precursor sequence
Structure
        10          20        30        40        50        60
ACAUCUGCAUGGCUGUA--|  CCU      GU        A     A     A  GUUGA 
                   CCA   UGUCGG  AGCUUAUC GACUG UGUUG CU     A
                   GGU   ACAGUC  UCGGGUAG CUGAC ACAAC GG     U
CUACCAGUCUACUUUCUAU^  UUU      UG        -     G     -  UACUC 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Ad Ad Br Br Br Ce Ce Ce Ce Co Co Co Co Dr Dr Du Du Du Du He He Hi Hi Il Il Je Je Ki Ki Ki Ki Li Li Li Li Me Me Mu Mu Mu Mu Mu Mu Mu Mu Ov Pa Pa St St St Te Ut Wh Br Fa He Ki La Li Li Lu Mu Pa Sk Sm Sp St Te Th
Mature sequence

Rno-Mir-21_5p
mirBase accessionMIMAT0000790
Sequence 
0- UAGCUUAUCAGACUGAUGUUGACU -24
Get sequence
Proposed targets microrna.org: MIMAT0000790
TargetScanVert: rno-miR-21-5p
miRDB: MIMAT0000790
Star sequence

Rno-Mir-21_3p*
mirBase accessionMIMAT0004711
Sequence 
38- CAACAGCAGUCGAUGGGCUGUC -60
Get sequence
Proposed targets microrna.org: MIMAT0004711
TargetScanVert: rno-miR-21-3p
miRDB: MIMAT0004711