MirGeneDB 2.1
MirGeneDB ID

Mal-Mir-21-P1

Family name MIR-21 (all species)
Seed AGCUUAU
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-21-P2 
Orthologues Aca-Mir-21  Ami-Mir-21  Bta-Mir-21  Cfa-Mir-21  Cli-Mir-21  Cmi-Mir-21  Cpi-Mir-21  Cpo-Mir-21  Dno-Mir-21  Dre-Mir-21-P1  Ebu-Mir-21  Ete-Mir-21  Gga-Mir-21  Gja-Mir-21  Gmo-Mir-21-P1  Hsa-Mir-21  Lch-Mir-21  Loc-Mir-21  Mdo-Mir-21  Mml-Mir-21  Mmu-Mir-21  Mun-Mir-21  Oan-Mir-21  Ocu-Mir-21  Pbv-Mir-21  Pma-Mir-21  Rno-Mir-21  Sha-Mir-21  Spt-Mir-21  Sto-Mir-21  Tgu-Mir-21  Tni-Mir-21-P1  Xtr-Mir-21 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884812.1: 781696-781755 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGGCAUGUCCGUCACUCUCGGCCUGUCACAUAGCUUAUCAGACUGGUGUUGGCUGUUAGAUUGCAAGGCGACAACAGUCUGUAGGCUGUCUGACAUUUCGGGCUCUUUCAUCUGACAACA
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Structure
        10          20        30        40        50          
AGGCAUGUCCGUCACUC--|   CC     C        U       G     G UGUUAG 
                   UCGG  UGUCA AUAGCUUA CAGACUG UGUUG C      \
                   GGCU  ACAGU UGUCGGAU GUCUGAC ACAGC G      A
ACAACAGUCUACUUUCUCG^   UU     C        -       A     G AACGUU 
.       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-21-P1_5p
mirBase accessionNone
Sequence 
0- UAGCUUAUCAGACUGGUGUUGGC -23
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Star sequence

Mal-Mir-21-P1_3p*
mirBase accessionNone
Sequence 
38- CGACAACAGUCUGUAGGCUGUC -60
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