Mir-21

MirGeneDB ID

Cli-Mir-21

Family name

MIR-21 (all species)

Seed

AGCUUAU

Species

Rock pigeon (Columba livia)

MiRBase ID

cli-mir-21

Paralogues

Orthologues

Aca-Mir-21 Ami-Mir-21 Bta-Mir-21 Cfa-Mir-21 Cmi-Mir-21 Cpi-Mir-21 Cpo-Mir-21 Dno-Mir-21 Dre-Mir-21-P1 Dre-Mir-21-P2 Ebu-Mir-21 Ete-Mir-21 Gga-Mir-21 Gja-Mir-21 Gmo-Mir-21-P1 Gmo-Mir-21-P2 Hsa-Mir-21 Lch-Mir-21 Loc-Mir-21 Mal-Mir-21-P1 Mal-Mir-21-P2 Mdo-Mir-21 Mml-Mir-21 Mmu-Mir-21 Mun-Mir-21 Oan-Mir-21 Ocu-Mir-21 Pbv-Mir-21 Pma-Mir-21 Rno-Mir-21 Sha-Mir-21 Spt-Mir-21 Sto-Mir-21 Tgu-Mir-21 Tni-Mir-21-P1 Tni-Mir-21-P2 Xla-Mir-21-P3 Xla-Mir-21-P4 Xtr-Mir-21

Node of Origin (locus)

Vertebrata

Node of Origin (family)

Vertebrata

Genome context
(colLiv2)

scaffold580: 435005-435064 [-]

Precursor
(pre-Mir +30nt flank)

CCAUGUCCAUGGCCGUACCAUCCUGUCGGAUAGCUUAUCAGACUGAUGUUGACUGUUGGAUCUCAUGGCAACAACAGUCGGUAGGCUGUCUGACAUUUUGGUAUCUCUCAUCUGACCGUU

Get precursor sequence

Structure

        10          20        30        40        50        60
CCAUGUCCAUGGCCGUA--|  UCC                A     A     A  GUUGG 
                   CCA   UGUCGGAUAGCUUAUC GACUG UGUUG CU     A
                   GGU   ACAGUCUGUCGGAUGG CUGAC ACAAC GG     U
UUGCCAGUCUACUCUCUAU^  UUU                -     A     -  UACUC 
.       110       100        90        80         70