MirGeneDB 2.1

MirGeneDB ID

Rno-Mir-155

Family name MIR-155 (all species)
Seed UAAUGCU
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-155
Paralogues
Orthologues Aca-Mir-155  Ami-Mir-155  Bta-Mir-155  Cfa-Mir-155  Cli-Mir-155  Cmi-Mir-155  Cpi-Mir-155  Cpo-Mir-155  Dno-Mir-155  Dre-Mir-155  Ebu-Mir-155  Ete-Mir-155  Gga-Mir-155  Gja-Mir-155  Gmo-Mir-155  Hsa-Mir-155  Lch-Mir-155  Loc-Mir-155  Mal-Mir-155  Mdo-Mir-155  Mml-Mir-155  Mmu-Mir-155  Mun-Mir-155  Oan-Mir-155  Ocu-Mir-155  Pbv-Mir-155  Pma-Mir-155  Sha-Mir-155  Spt-Mir-155-P3  Spt-Mir-155-P4  Sto-Mir-155  Tgu-Mir-155  Tni-Mir-155  Xla-Mir-155-P1  Xla-Mir-155-P2  Xtr-Mir-155 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(rn6)
chr11: 24176606-24176666 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGCUGGAGGCUUGCUGAAGGCUGUAUGCUGUUAAUGCUAAUUGUGAUAGGGGUUUUGGCCUCUGACUGACUCCUACCUGUUAGCAUUAACAGGAUACAGUGCCUGUUACUAGCAUUCACGU
Get precursor sequence
Structure
        10          20        30        40        50        60 
UGCUGGAGGCUUGCUGAAG--|      G              UGUGA        UUGGCC 
                     GCUGUAU CUGUUAAUGCUAAU     UAGGGGUU      \
                     UGACAUA GACAAUUACGAUUG     AUCCUCAG      U
UGCACUUACGAUCAUUGUCCG^      G              UCC--        UCAGUC 
 .       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Ad Ad Br Br Br Ce Ce Ce Ce Co Co Co Co Dr Dr Du Du Du Du He He Hi Hi Il Il Je Je Ki Ki Ki Ki Li Li Li Li Me Me Mu Mu Mu Mu Mu Mu Mu Mu Ov Pa Pa St St St Te Ut Wh Br Fa He Ki La Li Li Lu Mu Pa Sk Sm Sp St Te Th
Mature sequence

Rno-Mir-155_5p

mirBase accessionMIMAT0030409
Sequence
0- UUAAUGCUAAUUGUGAUAGGGGUU -24
Get sequence
Proposed targets TargetScanVert: rno-miR-155-5p
miRDB: MIMAT0030409
Star sequence

Rno-Mir-155_3p*

mirBase accessionMIMAT0030410
Sequence
39- CUCCUACCUGUUAGCAUUAACA -61
Get sequence
Proposed targets TargetScanVert: rno-miR-155-3p
miRDB: MIMAT0030410