| MirGeneDB ID | Gmo-Mir-155 |
|---|---|
| Family name | MIR-155 (all species) |
| Species | Cod (Gadus morhua) |
| MiRBase ID | gmo-mir-155 |
| Paralogues | |
| Orthologues | Aca-Mir-155 Ami-Mir-155 Bta-Mir-155 Cfa-Mir-155 Cja-Mir-155 Cli-Mir-155 Cmi-Mir-155 Cpi-Mir-155 Cpo-Mir-155 Dno-Mir-155 Dre-Mir-155 Ebu-Mir-155 Eca-Mir-155 Ete-Mir-155 Gga-Mir-155 Gja-Mir-155 Hsa-Mir-155 Laf-Mir-155 Lch-Mir-155 Loc-Mir-155 Mal-Mir-155 Mdo-Mir-155 Mml-Mir-155 Mmr-Mir-155 Mmu-Mir-155 Mun-Mir-155 Neu-Mir-155 Oan-Mir-155 Ocu-Mir-155 Pab-Mir-155 Pbv-Mir-155 Pma-Mir-155 Rno-Mir-155 Sha-Mir-155 Spt-Mir-155-P3 Spt-Mir-155-P4 Sto-Mir-155 Tgu-Mir-155 Tni-Mir-155 Xla-Mir-155-P1 Xla-Mir-155-P2 Xtr-Mir-155 |
| Node of Origin (locus) | Vertebrata |
| Node of Origin (family) | Vertebrata |
| Genome context (Gadus_morhua.gadMor1.dna.toplevel) |
contig49418: 761-820 [+] UCSC Ensembl |
| Seed | UAAUGCU |
| Precursor (pre-Mir +30nt flank) |
UUAAUGCUAAUCGUGAUAGGGGUUGUUCUCUCCAAGACGCCUAGCAUGCUAGCAUUAUCCGet precursor sequence |
| Structure | 10 20 U--| AU A G GUUCU UAAUGCUA CGUG UAGG GUU \ AUUACGAU GUAC AUCC CAG C CCU^ C- G G AACCU . 50 40 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UGUG in loop |
| Mature sequence | Gmo-Mir-155_5p |
| mirBase accession | MIMAT0044060 |
| Sequence |
0- UUAAUGCUAAUCGUGAUAGGGGU -23
Get sequence
|
| Star sequence | Gmo-Mir-155_3p* (predicted) |
| mirBase accession | None |
| Sequence |
38- GCCUAGCAUGCUAGCAUUAUCC -60
Get sequence
|
