Mir-155

MirGeneDB ID

Ocu-Mir-155

Family name

MIR-155 (all species)

Species

Rabbit (Oryctolagus cuniculus)

MiRBase ID

ocu-mir-155

Paralogues

Orthologues

Aca-Mir-155 Ami-Mir-155 Bta-Mir-155 Cfa-Mir-155 Cja-Mir-155 Cli-Mir-155 Cmi-Mir-155 Cpi-Mir-155 Cpo-Mir-155 Dno-Mir-155 Dre-Mir-155 Ebu-Mir-155 Eca-Mir-155 Ete-Mir-155 Gga-Mir-155 Gja-Mir-155 Gmo-Mir-155 Hsa-Mir-155 Laf-Mir-155 Lch-Mir-155 Loc-Mir-155 Mal-Mir-155 Mdo-Mir-155 Mml-Mir-155 Mmr-Mir-155 Mmu-Mir-155 Mun-Mir-155 Neu-Mir-155 Oan-Mir-155 Pab-Mir-155 Pbv-Mir-155 Pma-Mir-155 Rno-Mir-155 Sha-Mir-155 Spt-Mir-155-P3 Spt-Mir-155-P4 Sto-Mir-155 Tgu-Mir-155 Tni-Mir-155 Xla-Mir-155-P1 Xla-Mir-155-P2 Xtr-Mir-155

Node of Origin (locus)

Vertebrata

Node of Origin (family)

Vertebrata

Genome context
(oryCun2_add)

chr14: 154700617-154700677 [+] UCSC Ensembl

Seed

UAAUGCU

Precursor
(pre-Mir +30nt flank)

CACUGGAAGUCUGCUGUAGGCUGUAUGCUGUUAAUGCUAAUCGUGAUAGGGGUUUUUACCUCCAACUGACUCCUACAUGUUAGCAUUAACAGGGUAUGACGCCUCUUACUAGCUUUCACGU

Get precursor sequence

Structure

        10        20          30        40        50        60 
CACUGGAAGUCUGCUGUA   U--|   G             U    A        UUUACC 
                  GGC   GUAU CUGUUAAUGCUAA CGUG UAGGGGUU      \
                  CCG   UAUG GACAAUUACGAUU GUAC AUCCUCAG      U
UGCACUUUCGAUCAUUCU   CAG^   G             -    -        UCAACC 
 .       110       100        90        80          70