MirGeneDB 3.0
MirGeneDB ID

Cmi-Mir-155

Family name MIR-155 (all species)
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues
Orthologues Aca-Mir-155  Ami-Mir-155  Bta-Mir-155  Cfa-Mir-155  Cja-Mir-155  Cli-Mir-155  Cpi-Mir-155  Cpo-Mir-155  Dno-Mir-155  Dre-Mir-155  Ebu-Mir-155  Eca-Mir-155  Ete-Mir-155  Gga-Mir-155  Gja-Mir-155  Gmo-Mir-155  Hsa-Mir-155  Laf-Mir-155  Lch-Mir-155  Loc-Mir-155  Mal-Mir-155  Mdo-Mir-155  Mml-Mir-155  Mmr-Mir-155  Mmu-Mir-155  Mun-Mir-155  Neu-Mir-155  Oan-Mir-155  Ocu-Mir-155  Pab-Mir-155  Pbv-Mir-155  Pma-Mir-155  Rno-Mir-155  Sha-Mir-155  Spt-Mir-155-P3  Spt-Mir-155-P4  Sto-Mir-155  Tgu-Mir-155  Tni-Mir-155  Xla-Mir-155-P1  Xla-Mir-155-P2  Xtr-Mir-155 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI636076.1: 284932-284992 [-] UCSC Ensembl
Seed UAAUGCU
Precursor
(pre-Mir +30nt flank)		 
UUUGGACUGACAUUCUGAGCUGUUGCGGAUUUAAUGCUAAUUGUGAUAGGGGUUGUGAAUUUUGACCAGCUCCUACAUGUUAGCAUUAGCUCUGAGACGUGGCUGGUGACGGCACUGAUGA
Get precursor sequence
Structure
        10        20          30        40        50        60 
UUUGGACUGACAUUCUGA   --| UG    U           U   A        GUGAAU 
                  GCU  GU  CGGA UUAAUGCUAAU GUG UAGGGGUU      \
                  CGG  CA  GUCU GAUUACGAUUG UAC AUCCUCGA      U
AGUAGUCACGGCAGUGGU   UG^ GA    C           -   -        CCAGUU 
 .       110       100        90        80          70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
- +
Bl Br Ey Gi He In Ki Li Mu Ov Pa Re Sk Sp Te Ut
Mature sequence

Cmi-Mir-155_5p
mirBase accessionNone
Sequence 
0- UUAAUGCUAAUUGUGAUAGGGGUU -24
Get sequence
Star sequence

Cmi-Mir-155_3p*
mirBase accessionNone
Sequence 
39- CUCCUACAUGUUAGCAUUAGCU -61
Get sequence