MirGeneDB 2.1
MirGeneDB ID

Xla-Mir-155-P2

Family name MIR-155 (all species)
Seed UAAUGCU
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-155-P1 
Orthologues Aca-Mir-155  Ami-Mir-155  Bta-Mir-155  Cfa-Mir-155  Cli-Mir-155  Cmi-Mir-155  Cpi-Mir-155  Cpo-Mir-155  Dno-Mir-155  Dre-Mir-155  Ebu-Mir-155  Ete-Mir-155  Gga-Mir-155  Gja-Mir-155  Gmo-Mir-155  Hsa-Mir-155  Lch-Mir-155  Loc-Mir-155  Mal-Mir-155  Mdo-Mir-155  Mml-Mir-155  Mmu-Mir-155  Mun-Mir-155  Oan-Mir-155  Ocu-Mir-155  Pbv-Mir-155  Pma-Mir-155  Rno-Mir-155  Sha-Mir-155  Sto-Mir-155  Tgu-Mir-155  Tni-Mir-155  Xtr-Mir-155 
Node of Origin (locus) X. laevis
Node of Origin (family) Vertebrata
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030727.1: 16485960-16486021 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GACCUUGGUUUAAACCUGGGCUGCAUGGUAUUAAUGCUAAUCGUGAUAGGGGUUUUUUAUUAGCCAUUGACUCCUACAUGUUAGCAUUAUUAUCAUGCAGUUUCACUUUCCAAGGAAAACCA
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Structure
        10          20        30        40        50        60 
GACCUUGGUUUAAACCU--|            U         U    A        UUUUAU 
                   GGGCUGCAUGGUA UAAUGCUAA CGUG UAGGGGUU      U
                   UUUGACGUACUAU AUUACGAUU GUAC AUCCUCAG      A
ACCAAAAGGAACCUUUCAC^            U         -    -        UUACCG 
120       110       100        90         80         70
Deep sequencing
3' NTU Unknown
MotifsUG at 5p(-14)
Tissue expression
-   +
Eg He Re St St St St
Mature sequence

Xla-Mir-155-P2_5p (predicted)
mirBase accessionNone
Sequence 
0- UUAAUGCUAAUCGUGAUAGGGGUU -24
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Star sequence

Xla-Mir-155-P2_3p* (predicted)
mirBase accessionNone
Sequence 
40- CUCCUACAUGUUAGCAUUAUUA -62
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