MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-582

Family name MIR-582 (all species)
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-582
Paralogues
Orthologues Bta-Mir-582-v1  Cfa-Mir-582-v1  Cja-Mir-582  Cpo-Mir-582-v1  Dno-Mir-582-v1  Eca-Mir-582  Hsa-Mir-582-v1  Laf-Mir-582-v1  Mml-Mir-582-v1  Mmr-Mir-582-v1  Mmu-Mir-582-v1  Ocu-Mir-582  Pab-Mir-582-v1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rn6)		 chr2: 40863759-40863818 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-582-v1)		 Mir-582-v1 chr2: 40863759-40863818 [+] UCSC Ensembl
Mir-582-v2 chr2: 40863760-40863817 [+] UCSC Ensembl
Variant

Rno-Mir-582-v1
Seed ACCUGUU
Precursor
(pre-Mir +30nt flank)		 
CCAAUCUCCCUAGUAAUCUGUACUCUUUGGAUACAGUUGUUCAACCAGUUACUAAUCUAACUAAUUGUAACCUGUUGAACAACUGAACCCAAAGGGUGCAAAGUUGGAAACAUUUCAUUG
Get precursor sequence
Structure
        10          20        30        40        50         
CCAAUCUCCCUAGUAAUC--|           AUA            CA     UAAUCU 
                    UGUACUCUUUGG   CAGUUGUUCAAC  GUUAC      A
                    ACGUGGGAAACC   GUCAACAAGUUG  CAAUG      A
GUUACUUUACAAAGGUUGAA^           CAA            UC     UUAAUC 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
Dr Dr Ad Bi Bi Bi Bi Br Br Br Br Ce Ce Ce Ce Co Co Co Co Du Du Du Du Fa He He He Hi Hi Il Il Je Je Ki Ki Ki Ki Ki La Li Li Li Li Li Li Lu Me Me Mu Ov Pa Pa Pa Sk Sm So So So So Sp St St St St Te Te Th Ut Wh
Star sequence

Rno-Mir-582-v1_5p*
mirBase accessionMIMAT0012833
Sequence 
0- AUACAGUUGUUCAACCAGUUACU -23
Get sequence
Proposed targets microrna.org: MIMAT0012833
TargetScanVert: rno-miR-582-5p
miRDB: MIMAT0012833
Mature sequence

Rno-Mir-582-v1_3p
mirBase accessionMIMAT0017360
Sequence 
38- AACCUGUUGAACAACUGAACCC -60
Get sequence
Proposed targets TargetScanVert: rno-miR-582-3p
miRDB: MIMAT0017360
Variant

Rno-Mir-582-v2
Seed AACCUGU
Precursor
(pre-Mir +30nt flank)		 
CAAUCUCCCUAGUAAUCUGUACUCUUUGGAUACAGUUGUUCAACCAGUUACUAAUCUAACUAAUUGUAACCUGUUGAACAACUGAACCCAAAGGGUGCAAAGUUGGAAACAUUUCAUU
Get precursor sequence
Structure
        10          20        30        40        50        
CAAUCUCCCUAGUAAUC--|           AUA            CA     UAAUCU 
                   UGUACUCUUUGG   CAGUUGUUCAAC  GUUAC      A
                   ACGUGGGAAACC   GUCAACAAGUUG  CAAUG      A
UUACUUUACAAAGGUUGAA^           CAA            UC     UUAAUC 
      110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
Dr Dr Ad Bi Bi Bi Bi Br Br Br Br Ce Ce Ce Ce Co Co Co Co Du Du Du Du Fa He He He Hi Hi Il Il Je Je Ki Ki Ki Ki Ki La Li Li Li Li Li Li Lu Me Me Mu Ov Pa Pa Pa Sk Sm So So So So Sp St St St St Te Te Th Ut Wh
Star sequence

Rno-Mir-582-v2_5p*
mirBase accessionMIMAT0012833
Sequence 
0- UACAGUUGUUCAACCAGUUACUA -23
Get sequence
Proposed targets microrna.org: MIMAT0012833
TargetScanVert: rno-miR-582-5p
miRDB: MIMAT0012833
Mature sequence

Rno-Mir-582-v2_3p
mirBase accessionMIMAT0017360
Sequence 
36- UAACCUGUUGAACAACUGAACC -58
Get sequence
Proposed targets TargetScanVert: rno-miR-582-3p
miRDB: MIMAT0017360