MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-193-P2a

Family name MIR-193 (all species)
Species Norway rat (Rattus norvegicus)
MiRBase ID
Paralogues Rno-Mir-193-P1a  Rno-Mir-193-P1b  Rno-Mir-193-P2b 
Orthologues Ami-Mir-193-P2a  Bge-Mir-193-P2  Bta-Mir-193-P2a  Cbr-Mir-193-P2-v1  Cel-Mir-193-P2-v1  Cfa-Mir-193-P2a  Cja-Mir-193-P2a  Cli-Mir-193-P2a  Cmi-Mir-193-P2a  Cpi-Mir-193-P2a  Cpo-Mir-193-P2a  Cte-Mir-193-P2  Dgr-Mir-193-P2  Dlo-Mir-193-P2  Dno-Mir-193-P2a  Dre-Mir-193-P2a  Ebu-Mir-193-P2  Eca-Mir-193-P2a  Ete-Mir-193-P2a  Gga-Mir-193-P2a  Hme-Mir-193-P2  Hru-Mir-193-P2  Hsa-Mir-193-P2a  Laf-Mir-193-P2a  Lch-Mir-193-P2a  Lgi-Mir-193-P2  Llo-Mir-193-P2-v1  Loc-Mir-193-P2a  Mdo-Mir-193-P2a  Mgi-Mir-193-P2  Mml-Mir-193-P2a  Mmr-Mir-193-P2a  Mmu-Mir-193-P2a  Mun-Mir-193-P2a  Neu-Mir-193-P2a  Oan-Mir-193-P2a  Ocu-Mir-193-P2a  Pab-Mir-193-P2a  Pau-Mir-193-P2  Pbv-Mir-193-P2a  Pdu-Mir-193-P2  Pfl-Mir-193-P2  Pma-Mir-193-P2  Pmi-Mir-193-P2  Pve-Mir-193-P2  Rph-Mir-193-P2  Sha-Mir-193-P2a  Sko-Mir-193-P2  Snu-Mir-193-P2  Spt-Mir-193-P2a  Spu-Mir-193-P2  Sro-Mir-193-P2  Sto-Mir-193-P2a  Tca-Mir-193-P2  Tgu-Mir-193-P2a  Xbo-Mir-193-P2  Xla-Mir-193-P2a3  Xla-Mir-193-P2a4  Xtr-Mir-193-P2a 
Node of Origin (locus) Vertebrata
Node of Origin (family) Bilateria
Genome context
(rn6)		 chr14: 30326669-30326729 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-193-P2a)		 Mir-193-P2a chr14: 30326669-30326729 [-] UCSC Ensembl
Mir-193-P1a chr14: 30331060-30331118 [-] UCSC Ensembl
Seed AAUGCCC
Precursor
(pre-Mir +30nt flank)		 
GACAGCUGAUUGGUUACCGCAGGGAAAAUGAGGGACUUUUGGGGGCAGAUGUGUUUCCAUUCCACUAUCAUAAUGCCCCUAAAAAUCCUUAUUGCUCUUGCAGUAUUCCUCGGGGGUCCCA
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Structure
        10          20        30        40        50        60 
GACAGCUGAUUGGUUACC--|     AA        AC           GA    UUUCCAU 
                    GCAGGG  AAUGAGGG  UUUUGGGGGCA  UGUG       \
                    CGUUCU  UUAUUCCU  AAAAUCCCCGU  AUAC       U
ACCCUGGGGGCUCCUUAUGA^     CG        A-           A-    UAUCACC 
 .       110       100        90         80         70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
- +
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Star sequence

Rno-Mir-193-P2a_5p*
mirBase accessionNone
Sequence 
0- AGGGACUUUUGGGGGCAGAUGUG -23
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Mature sequence

Rno-Mir-193-P2a_3p
mirBase accessionNone
Sequence 
40- UAAUGCCCCUAAAAAUCCUUA -61
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