MirGeneDB 2.1

86 microRNA genes with seed AAUGCCC
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Cpi-Mir-33-P1 cpi-mir-33-2 MIR-33 UGCAUUG MIMAT0037689 MIMAT0037691 JH584542 9197615 9197674 + Gnathostomata Bilateria No 1 1 1
Isc-Mir-193-P1 isc-mir-5309 MIR-193 AAUGCCC None MIMAT0021379 DS745599 24809 24873 - Bilateria Bilateria No 1
Bge-Mir-193-P2 None MIR-193 AAUGCCC None None KZ618026.1 30334 30399 - Bilateria Bilateria No 1
Cgi-Mir-193-P2 None MIR-193 AAUGCCC None None scaffold1144 349158 349216 + Bilateria Bilateria No 1
Cte-Mir-193-P2 cte-mir-365 MIR-193 AAUGCCC None MIMAT0009543 CAPTEscaffold_481 63203 63261 - Bilateria Bilateria No 1
Ebu-Mir-193-P2 None MIR-193 AAUGCCC None None FYBX02010134.1 1759195 1759255 + Bilateria Bilateria No 1 1
Lgi-Mir-193-P2 None MIR-193 AAUGCCC None None LOTGIsca_31 1573998 1574056 + Bilateria Bilateria Yes 1
Pfl-Mir-193-P2 None MIR-193 AAUGCCC None None LD349275.1 117222 117282 + Bilateria Bilateria No 1
Pma-Mir-193-P2 None MIR-193 AAUGCCC None None NC_046126.1 4954419 4954480 - Bilateria Bilateria Unknown 1
Pmi-Mir-193-P2 None MIR-193 AAUGCCC None None JH779788.1 4968 5032 - Bilateria Bilateria No 1
Sko-Mir-193-P2 sko-mir-365 MIR-193 AAUGCCC MIMAT0019159 MIMAT0009643 NW_003119955.1 8988 9044 + Bilateria Bilateria No 1 1
Spu-Mir-193-P2 None MIR-193 AAUGCCC None None AAGJ06000014.1 16475259 16475346 + Bilateria Bilateria No 1
Tca-Mir-193-P2 tca-mir-2788 MIR-193 AAUGCCC MIMAT0018798 MIMAT0018799 LG8 5228629 5228689 - Bilateria Bilateria No
Xbo-Mir-193-P2 None MIR-193 AAUGCCC None None 3C-assembly_contig_1899 7008745 7008803 + Bilateria Bilateria No 1
Cbr-Mir-193-P2-v1 cbr-mir-786 MIR-193 AAUGCCC None MIMAT0004287 X 13610830 13610891 + Bilateria Bilateria No
Cel-Mir-193-P2-v1 cel-mir-786 MIR-193 AAUGCCC MIMAT0015239 MIMAT0004221 chrX 7882766 7882826 + Bilateria Bilateria No
Ami-Mir-193-P2a ami-mir-365-1 MIR-193 AAUGCCC MIMAT0038271 MIMAT0038272 NW_017711568.1 5484164 5484224 - Vertebrata Bilateria Yes 1
Bta-Mir-193-P2a bta-mir-365-1 MIR-193 AAUGCCC MIMAT0012539 MIMAT0004341 NC_037352.1 13253599 13253659 + Vertebrata Bilateria Yes 1
Cfa-Mir-193-P2a cfa-mir-365-1 MIR-193 AAUGCCC None MIMAT0001540 chr6 28873146 28873206 - Vertebrata Bilateria Yes 1
Cli-Mir-193-P2a cli-mir-365-1 MIR-193 AAUGCCC MIMAT0038624 MIMAT0038625 scaffold251 992954 993014 + Vertebrata Bilateria Yes 1
Cmi-Mir-193-P2a None MIR-193 AAUGCCC None None KI636017.1 2193 2253 + Vertebrata Bilateria No 1
Cpi-Mir-193-P2a cpi-mir-365-1 MIR-193 AAUGCCC None MIMAT0037870 JH584814 1965562 1965622 - Vertebrata Bilateria Yes 1
Cpo-Mir-193-P2a cpo-mir-365-1 MIR-193 AAUGCCC MIMAT0047194 MIMAT0047195 scaffold_4 33129619 33129679 + Vertebrata Bilateria Yes 1
Dno-Mir-193-P2a dno-mir-365-1 MIR-193 AAUGCCC MIMAT0047835 MIMAT0047836 JH569587 2255954 2256014 + Vertebrata Bilateria Yes 1
Dre-Mir-193-P2a dre-mir-365-1 MIR-193 AAUGCCC None MIMAT0001875 chr3 43716841 43716901 + Vertebrata Bilateria Yes 1
Ete-Mir-193-P2a None MIR-193 AAUGCCC None None JH980314 43347641 43347701 + Vertebrata Bilateria Yes 1
Gga-Mir-193-P2a gga-mir-365-1 MIR-193 AAUGCCC MIMAT0026630 MIMAT0003361 14 1172380 1172440 + Vertebrata Bilateria Yes 1
Hsa-Mir-193-P2a hsa-mir-365a MIR-193 AAUGCCC MIMAT0009199 MIMAT0000710 chr16 14309300 14309360 + Vertebrata Bilateria Yes 1
Lch-Mir-193-P2a None MIR-193 AAUGCCC None None JH127571.1 680849 680910 + Vertebrata Bilateria Unknown 1
Loc-Mir-193-P2a None MIR-193 AAUGCCC None None LG13 139122 139182 - Vertebrata Bilateria Yes 1
Mdo-Mir-193-P2a mdo-mir-365 MIR-193 AAUGCCC MIMAT0026683 MIMAT0004137 6 108690927 108690987 + Vertebrata Bilateria Yes 1
Mml-Mir-193-P2a mml-mir-365-1 MIR-193 AAUGCCC MIMAT0026856 MIMAT0006291 chr20 14436205 14436265 + Vertebrata Bilateria Yes 1
Mmu-Mir-193-P2a mmu-mir-365-1 MIR-193 AAUGCCC MIMAT0017077 MIMAT0000711 chr16 13453855 13453915 + Vertebrata Bilateria Yes 1
Mun-Mir-193-P2a None MIR-193 AAUGCCC None None 193-P2a_LR594639.1:36382021-36382282 101 162 + Vertebrata Bilateria No 1
Oan-Mir-193-P2a oan-mir-365-1 MIR-193 AAUGCCC MIMAT0006822 MIMAT0006823 NC_041729.1 52321465 52321525 + Vertebrata Bilateria Yes 1
Ocu-Mir-193-P2a ocu-mir-365-1 MIR-193 AAUGCCC MIMAT0048399 MIMAT0048400 chr6 7416450 7416510 + Vertebrata Bilateria Yes 1
Pbv-Mir-193-P2a pbv-mir-365-1 MIR-193 AAUGCCC None MIMAT0039044 KE956029.1 2947 3006 + Vertebrata Bilateria Yes 1
Rno-Mir-193-P2a None MIR-193 AAUGCCC None None chr14 30326669 30326729 - Vertebrata Bilateria Yes 1
Sha-Mir-193-P2a None MIR-193 AAUGCCC None None GL841527.1 142087 142147 + Vertebrata Bilateria Yes 1
Spt-Mir-193-P2a None MIR-193 AAUGCCC None None QEPC01007559.1 13494940 13495000 + Vertebrata Bilateria Unknown 1
Sto-Mir-193-P2a None MIR-193 AAUGCCC None None BFAA01002690.1 352078 352138 - Vertebrata Bilateria No 1
Tgu-Mir-193-P2a tgu-mir-365-1 MIR-193 AAUGCCC MIMAT0027013 MIMAT0014582 14 10038010 10038070 + Vertebrata Bilateria Yes 1
Xtr-Mir-193-P2a xtr-mir-365-1 MIR-193 AAUGCCC None MIMAT0003637 chr9 32274432 32274492 - Vertebrata Bilateria Yes 1
Xla-Mir-193-P2a3 None MIR-193 AAUGCCC None None NC_030740.1 89655681 89655741 - X. laevis Bilateria Yes 1
Xla-Mir-193-P2a4 None MIR-193 AAUGCCC None None NC_030741.1 80385641 80385701 - X. laevis Bilateria Yes 1
Aca-Mir-193-P2b aca-mir-365 MIR-193 AAUGCCC MIMAT0021947 MIMAT0021948 GL343198.1 1087521 1087582 + Vertebrata Bilateria No 1
Ami-Mir-193-P2b ami-mir-365-2 MIR-193 AAUGCCC MIMAT0038273 MIMAT0038272 NW_017711527.1 5161044 5161105 - Vertebrata Bilateria No 1
Bta-Mir-193-P2b bta-mir-365-2 MIR-193 AAUGCCC None MIMAT0004341 NC_037346.1 18461524 18461584 - Vertebrata Bilateria No 1
Cfa-Mir-193-P2b cfa-mir-365-2 MIR-193 AAUGCCC None MIMAT0001540 chr9 41303114 41303174 - Vertebrata Bilateria No 1
Cli-Mir-193-P2b cli-mir-365-2 MIR-193 AAUGCCC MIMAT0038626 MIMAT0038625 scaffold111 348905 348966 - Vertebrata Bilateria No 1
Cmi-Mir-193-P2b None MIR-193 AAUGCCC None None KI635919.1 3046310 3046371 + Vertebrata Bilateria No 1
Cpi-Mir-193-P2b cpi-mir-365-2 MIR-193 AAUGCCC MIMAT0037871 MIMAT0037870 JH584464 1875174 1875235 + Vertebrata Bilateria No 1
Cpo-Mir-193-P2b cpo-mir-365-2 MIR-193 AAUGCCC MIMAT0047196 MIMAT0047195 scaffold_32 15051644 15051704 - Vertebrata Bilateria No 1
Dno-Mir-193-P2b dno-mir-365-2 MIR-193 AAUGCCC MIMAT0047837 MIMAT0047836 JH569875 658736 658796 + Vertebrata Bilateria No 1
Ete-Mir-193-P2b None MIR-193 AAUGCCC None None JH980319 6858357 6858417 + Vertebrata Bilateria No 1
Gga-Mir-193-P2b gga-mir-365-2 MIR-193 AAUGCCC MIMAT0031075 MIMAT0003361 18 6430650 6430711 + Vertebrata Bilateria No 1
Gja-Mir-193-P2b None MIR-193 AAUGCCC None None NW_015166472.1 115094 115155 + Vertebrata Bilateria No 1
Hsa-Mir-193-P2b hsa-mir-365b MIR-193 AAUGCCC MIMAT0022833 MIMAT0022834 chr17 31575439 31575499 + Vertebrata Bilateria No 1
Lch-Mir-193-P2b None MIR-193 AAUGCCC None None JH126741.1 2084155 2084216 - Vertebrata Bilateria Unknown 1
Loc-Mir-193-P2b None MIR-193 AAUGCCC None None LG10 41579744 41579805 + Vertebrata Bilateria No 1
Mml-Mir-193-P2b mml-mir-365-2 MIR-193 AAUGCCC MIMAT0031081 MIMAT0006291 chr16 25667257 25667317 + Vertebrata Bilateria No 1
Mmu-Mir-193-P2b mmu-mir-365-2 MIR-193 AAUGCCC MIMAT0017179 MIMAT0000711 chr11 79726428 79726488 + Vertebrata Bilateria No 1
Mun-Mir-193-P2b None MIR-193 AAUGCCC None None 193-P2b_LR594637.1:326458278-326458540 101 163 + Vertebrata Bilateria No 1
Oan-Mir-193-P2b oan-mir-365-2 MIR-193 AAUGCCC MIMAT0031067 MIMAT0006823 NC_041742.1 2861999 2862060 + Vertebrata Bilateria No 1
Ocu-Mir-193-P2b ocu-mir-365-2 MIR-193 AAUGCCC MIMAT0048401 MIMAT0048400 chr19 21192656 21192716 + Vertebrata Bilateria No 1
Pbv-Mir-193-P2b pbv-mir-365-2 MIR-193 AAUGCCC None MIMAT0039044 KE956678.1 59935 59997 - Vertebrata Bilateria No 1
Rno-Mir-193-P2b rno-mir-365 MIR-193 AAUGCCC MIMAT0017184 MIMAT0001549 chr10 67079811 67079871 + Vertebrata Bilateria No 1
Sha-Mir-193-P2b None MIR-193 AAUGCCC None None GL857000.1 4455894 4455955 - Vertebrata Bilateria No 1
Spt-Mir-193-P2b None MIR-193 AAUGCCC None None QEPC01005108.1 2978534 2978595 - Vertebrata Bilateria Unknown 1
Sto-Mir-193-P2b None MIR-193 AAUGCCC None None BFAA01011961.1 34206 34261 - Vertebrata Bilateria Unknown 1
Tgu-Mir-193-P2b tgu-mir-365-2 MIR-193 AAUGCCC MIMAT0031088 MIMAT0014582 18 10900791 10900853 + Vertebrata Bilateria No 1
Dre-Mir-193-P2b1 dre-mir-365-2 MIR-193 AAUGCCC None MIMAT0001875 chr3 35961006 35961067 + Clupeocephala Bilateria No 1
Dre-Mir-193-P2b2 dre-mir-365-3 MIR-193 AAUGCCC None MIMAT0001875 chr6 18516330 18516391 - Clupeocephala Bilateria No 1
Gmo-Mir-193-P2b2 gmo-mir-365 MIR-193 AAUGCCC MIMAT0044290 MIMAT0044291 GeneScaffold_4492 289041 289102 + Clupeocephala Bilateria No 1
Mal-Mir-193-P2b2 None MIR-193 AAUGCCC None None KV884720.1 402380 402441 + Clupeocephala Bilateria Unknown 1
Tni-Mir-193-P2b2 tni-mir-365 MIR-193 AAUGCCC None MIMAT0002968 Un_random 38921292 38921353 + Clupeocephala Bilateria No 1
Efe-Mir-193-P2c-v1 None MIR-193 AAUGCCC None None Efet.01.30034 1214 1278 - E. fetida Bilateria No 1
Efe-Mir-193-P2d-v1 None MIR-193 AAUGCCC None None Efet.01.423007 841 901 + E. fetida Bilateria No 1
Efe-Mir-193-P2e-v1 None MIR-193 AAUGCCC None None Efet.01.517063 880 942 - E. fetida Bilateria No
Efe-Mir-193-P2f-v1 None MIR-193 AAUGCCC None None Efet.01.1370857 57 119 + E. fetida Bilateria No 1 1
Lpo-Mir-193-P2n None MIR-193 AAUGCCC None None NW_013673421.1 20320 20381 + L. polyphemus Bilateria No 1 1
Lpo-Mir-193-P2o None MIR-193 AAUGCCC None None NW_013669046.1 9158 9219 + L. polyphemus Bilateria No
Lan-Mir-193-P2p None MIR-193 AAUGCCC None None LFEI01000500 137739 137796 + L. anatina Bilateria No 1
Lan-Mir-193-P2q None MIR-193 AAUGCCC None None LFEI01000010 43174 43231 + L. anatina Bilateria No 1
Lpo-Mir-193-P2r None MIR-193 AAUGCCC None None NW_013665895.1 74428 74489 - L. polyphemus Bilateria No 1
Csc-Mir-193-P2v None MIR-193 AAUGCCC None None NW_019387724.1 416 476 + C. sculpturatus Bilateria Unknown 1

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