MirGeneDB 3.0
MirGeneDB ID

Lan-Mir-193-P2q

Family name MIR-193 (all species)
Species Lingula (Lingula anatina)
MiRBase ID
Paralogues Lan-Mir-193-P1p  Lan-Mir-193-P1q  Lan-Mir-193-P2p 
Orthologues Bge-Mir-193-P2  Cbr-Mir-193-P2-v1  Cel-Mir-193-P2-v1  Cte-Mir-193-P2  Dgr-Mir-193-P2  Dlo-Mir-193-P2  Ebu-Mir-193-P2  Hme-Mir-193-P2  Hru-Mir-193-P2  Lgi-Mir-193-P2  Llo-Mir-193-P2-v1  Mgi-Mir-193-P2  Pau-Mir-193-P2  Pdu-Mir-193-P2  Pfl-Mir-193-P2  Pma-Mir-193-P2  Pmi-Mir-193-P2  Pve-Mir-193-P2  Rph-Mir-193-P2  Sko-Mir-193-P2  Snu-Mir-193-P2  Spu-Mir-193-P2  Sro-Mir-193-P2  Tca-Mir-193-P2  Xbo-Mir-193-P2 
Node of Origin (locus) L. anatina
Node of Origin (family) Bilateria
Genome context
(LinAna_1.0)		 LFEI01000500: 137739-137796 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-193-P2q)		 Mir-193-P1p LFEI01000500: 127748-127808 [+] Ensembl
Mir-193-P2q LFEI01000500: 137739-137796 [+] Ensembl
Seed AAUGCCC
Precursor
(pre-Mir +30nt flank)		 
AAAUGAGGGUUAGAGAGACGCAAGUAUAUUUGGGAUUUCGUGGGACAUUCUGUGAGAUAGAAAUGACAAUGCCCUGCGAAAUCCUAAACGUGCAUGUACGACACUCCUUUCACACGCA
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Structure
        10          20        30        40        50         
AAAUGAGGGUUAGAGAGAC--|  A   UA            UG  A   UC   GAGAU 
                     GCA GUA  UUUGGGAUUUCG  GG CAU  UGU     A
                     UGU CGU  AAAUCCUAAAGC  CC GUA  ACA     G
ACGCACACUUUCCUCACAGCA^  A   GC            GU  C   --   GUAAA 
      110       100        90        80        70          60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
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Star sequence

Lan-Mir-193-P2q_5p*
mirBase accessionNone
Sequence 
0- UGGGAUUUCGUGGGACAUUCUGUG -24
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Mature sequence

Lan-Mir-193-P2q_3p
mirBase accessionNone
Sequence 
36- CAAUGCCCUGCGAAAUCCUAAA -58
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