MirGeneDB 3.0
MirGeneDB ID

Lan-Mir-193-P1q

Family name MIR-193 (all species)
Species Lingula (Lingula anatina)
MiRBase ID
Paralogues Lan-Mir-193-P1p  Lan-Mir-193-P2p  Lan-Mir-193-P2q 
Orthologues Aae-Mir-193-P1  Aga-Mir-193-P1  Bge-Mir-193-P1  Cbr-Mir-193-P1-v1  Cel-Mir-193-P1-v1  Cte-Mir-193-P1  Dan-Mir-193-P1-v1  Dgr-Mir-193-P1  Dlo-Mir-193-P1  Dma-Mir-193-P1  Dme-Mir-193-P1-v1  Dmo-Mir-193-P1-v1  Dpu-Mir-193-P1  Dsi-Mir-193-P1-v1  Dya-Mir-193-P1-v1  Eba-Mir-193-P1  Esc-Mir-193-P1  Gpa-Mir-193-P1  Hme-Mir-193-P1  Hru-Mir-193-P1  Isc-Mir-193-P1  Lgi-Mir-193-P1  Lhy-Mir-193-P1  Mgi-Mir-193-P1  Mom-Mir-193-P1  Npo-Mir-193-P1  Obi-Mir-193-P1  Ofu-Mir-193-P1  Ovu-Mir-193-P1  Pau-Mir-193-P1  Pcr-Mir-193-P1  Pma-Mir-193-P1  Pmi-Mir-193-P1  Pve-Mir-193-P1  Rph-Mir-193-P1  Snu-Mir-193-P1  Tca-Mir-193-P1  War-Mir-193-P1  Xbo-Mir-193-P1 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(LinAna_1.0)		 LFEI01000010: 32734-32794 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-193-P1q)		 Mir-193-P1q LFEI01000010: 32734-32794 [+] Ensembl
Mir-193-P2p LFEI01000010: 43174-43231 [+] Ensembl
Seed ACUGGCC
Precursor
(pre-Mir +30nt flank)		 
AACAGUACGGGCUACACGUCCUCUCUCAUCAGGGAGUUUGCUCGCCAUGCUUAUGGCUCUGAAUCUAUAAACUGGCCUGCAAAAUCCCUUCUGACGUGGGGACAUUGAGCAAACCCGUGAU
Get precursor sequence
Structure
        10         20         30        40        50          
AACAGUACGGGCUACAC-      UC-|  UC     G     UC    UGCUUAUGGCUC 
                  GUCCUC   UCA  AGGGA UUUGC  GCCA            \
                  CAGGGG   AGU  UCCCU AAACG  CGGU            U
UAGUGCCCAAACGAGUUA      UGC^  CU     A     UC    CAAAUAUCUAAG 
 .       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
To To
Star sequence

Lan-Mir-193-P1q_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGGGAGUUUGCUCGCCAUGCUUA -23
Get sequence
Mature sequence

Lan-Mir-193-P1q_3p
mirBase accessionNone
Sequence 
39- AACUGGCCUGCAAAAUCCCUUC -61
Get sequence