MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-23-P3

Family name MIR-23 (all species)
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-23a
Paralogues Rno-Mir-23-P2 
Orthologues Aca-Mir-23-P3  Ami-Mir-23-P3  Bta-Mir-23-P3  Cfa-Mir-23-P3  Cja-Mir-23-P3  Cmi-Mir-23-P3a  Cmi-Mir-23-P3b  Cpi-Mir-23-P3  Cpo-Mir-23-P3  Dno-Mir-23-P3  Dre-Mir-23-P3  Eca-Mir-23-P3  Ete-Mir-23-P3  Gja-Mir-23-P3  Gmo-Mir-23-P3  Hsa-Mir-23-P3  Laf-Mir-23-P3  Lch-Mir-23-P3  Mal-Mir-23-P3  Mdo-Mir-23-P3  Mml-Mir-23-P3  Mmr-Mir-23-P3  Mmu-Mir-23-P3  Mun-Mir-23-P3e  Mun-Mir-23-P3f  Neu-Mir-23-P3  Oan-Mir-23-P3  Ocu-Mir-23-P3  Pab-Mir-23-P3  Pbv-Mir-23-P3  Sha-Mir-23-P3  Sto-Mir-23-P3  Tgu-Mir-23-P3  Tni-Mir-23-P3  Xla-Mir-23-P3c  Xla-Mir-23-P3d  Xtr-Mir-23-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(rn6)		 chr19: 25318591-25318649 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-23-P3)		 Mir-181-P2c chr19: 25290062-25290123 [-] UCSC Ensembl
Mir-181-P1c chr19: 25290233-25290293 [-] UCSC Ensembl
Mir-23-P3 chr19: 25318591-25318649 [+] UCSC Ensembl
Mir-27-P3 chr19: 25318749-25318811 [+] UCSC Ensembl
Mir-24-P3 chr19: 25318887-25318944 [+] UCSC Ensembl
Seed UCACAUU
Precursor
(pre-Mir +30nt flank)		 
UGCUGUCCCCUCACUGUGCCUCGGCCGGCUGGGGUUCCUGGGGAUGGGAUUUGAUGCCAGUCACAAAUCACAUUGCCAGGGAUUUCCAACUGACCCUGUGCCCUGCCUUGGGGCCUCGU
Get precursor sequence
Structure
        10         20         30         40        50        
UGCUGUCCCCUCACUGU-  CUC-  C   C   -|        G    G     GAUGC 
                  GC    GG CGG UGG GGUUCCUGG GAUG GAUUU     C
                  CG    CC GUC ACC UUAGGGACC UUAC CUAAA     A
UGCUCCGGGGUUCCGUCC  UGUC  A   A   U^        G    A     CACUG 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
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Star sequence

Rno-Mir-23-P3_5p*
mirBase accessionMIMAT0004712
Sequence 
0- GGGGUUCCUGGGGAUGGGAUUU -22
Get sequence
Proposed targets microrna.org: MIMAT0004712
TargetScanVert: rno-miR-23a-5p
miRDB: MIMAT0004712
Mature sequence

Rno-Mir-23-P3_3p
mirBase accessionMIMAT0000792
Sequence 
36- AUCACAUUGCCAGGGAUUUCCAA -59
Get sequence
Proposed targets microrna.org: MIMAT0000792
TargetScanVert: rno-miR-23a-3p
miRDB: MIMAT0000792