MirGeneDB 2.1

MirGeneDB ID

Oan-Mir-23-P3

Family name MIR-23 (all species)
Seed UCACAUU
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-23a
Paralogues Oan-Mir-23-P2 
Orthologues Aca-Mir-23-P3  Ami-Mir-23-P3  Bta-Mir-23-P3  Cfa-Mir-23-P3  Cmi-Mir-23-P3a  Cmi-Mir-23-P3b  Cpi-Mir-23-P3  Cpo-Mir-23-P3  Dno-Mir-23-P3  Dre-Mir-23-P3  Ete-Mir-23-P3  Gja-Mir-23-P3  Gmo-Mir-23-P3  Hsa-Mir-23-P3  Lch-Mir-23-P3  Mal-Mir-23-P3  Mdo-Mir-23-P3  Mml-Mir-23-P3  Mmu-Mir-23-P3  Mun-Mir-23-P3e  Mun-Mir-23-P3f  Ocu-Mir-23-P3  Pbv-Mir-23-P3  Rno-Mir-23-P3  Sha-Mir-23-P3  Sto-Mir-23-P3  Tgu-Mir-23-P3  Tni-Mir-23-P3  Xla-Mir-23-P3c  Xla-Mir-23-P3d  Xtr-Mir-23-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(mOrnAna1.p.v1_plustraces)
Oan-Mir-23-P1_KAAE-bpy46e04: 255-315 [-]
Precursor
(pre-Mir +30nt flank)
UCUACCCGAGCCCCUCUGCCGCCGGCGGCUGGGGUUCCUGGUGAUGCGAUUUUCUUGUGCUCGCCAAAAUCACAUUGCCAGGGAUUUCCAACUGGCGGCGUGCCCAGCUGGCAGGAGUGCC
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Structure
        10          20        30         40        50         
UCUACCCGAGCCCCUCU-  -     G   C   -|        UG   C     UCUUGU 
                  GC CGCCG CGG UGG GGUUCCUGG  AUG GAUUU      G
                  CG GCGGC GUC ACC UUAGGGACC  UAC CUAAA      C
CCGUGAGGACGGUCGACC  U     G   A   U^        GU   A     ACCGCU 
 .       110       100        90        80        70        60
Deep sequencing
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CommentNot in assenbmly but in trace archives.
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
Br Ce He Ki Te
Star sequence

Oan-Mir-23-P3_5p*

mirBase accessionMIMAT0007060
Sequence
0- GGGGUUCCUGGUGAUGCGAUUU -22
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Mature sequence

Oan-Mir-23-P3_3p

mirBase accessionMIMAT0007061
Sequence
38- AUCACAUUGCCAGGGAUUUCCAA -61
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