MirGeneDB 2.1
MirGeneDB ID

Bta-Mir-23-P3

Family name MIR-23 (all species)
Seed UCACAUU
Species Cow (Bos taurus)
MiRBase ID bta-mir-23a
Paralogues Bta-Mir-23-P2 
Orthologues Aca-Mir-23-P3  Ami-Mir-23-P3  Cfa-Mir-23-P3  Cmi-Mir-23-P3a  Cmi-Mir-23-P3b  Cpi-Mir-23-P3  Cpo-Mir-23-P3  Dno-Mir-23-P3  Dre-Mir-23-P3  Ete-Mir-23-P3  Gja-Mir-23-P3  Gmo-Mir-23-P3  Hsa-Mir-23-P3  Lch-Mir-23-P3  Mal-Mir-23-P3  Mdo-Mir-23-P3  Mml-Mir-23-P3  Mmu-Mir-23-P3  Mun-Mir-23-P3e  Mun-Mir-23-P3f  Oan-Mir-23-P3  Ocu-Mir-23-P3  Pbv-Mir-23-P3  Rno-Mir-23-P3  Sha-Mir-23-P3  Sto-Mir-23-P3  Tgu-Mir-23-P3  Tni-Mir-23-P3  Xla-Mir-23-P3c  Xla-Mir-23-P3d  Xtr-Mir-23-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037334.1: 11838711-11838769 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-23-P3)		 Mir-181-P2c NC_037334.1: 11811294-11811353 [-] UCSC Ensembl
Mir-181-P1c NC_037334.1: 11811475-11811535 [-] UCSC Ensembl
Mir-23-P3 NC_037334.1: 11838711-11838769 [+] UCSC Ensembl
Mir-27-P3 NC_037334.1: 11838890-11838950 [+] UCSC Ensembl
Mir-24-P3 NC_037334.1: 11839043-11839102 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGCCCCUUGACCCUGGUGCCAUGGCCGGCUGGGGUUCCUGGGGAUGGGAUUUGCUGCCUGUCACAAAUCACAUUGCCAGGGAUUUCCAACCGACCCUGAGCCCUGUCUCCGGGGCCGCC
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Structure
        10          20        30         40        50        
UGCCCCUUGACCCUGGU-  -  U  C   C   -|        G    G     GCUGC 
                  GC CA GG CGG UGG GGUUCCUGG GAUG GAUUU     C
                  CG GU CC GCC ACC UUAGGGACC UUAC CUAAA     U
CCGCCGGGGCCUCUGUCC  A  C  A   A   U^        G    A     CACUG 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Ad Cd Fe Bo Br Ce Co Co De He Hy Ir Ki La Lo No Op Or Pe Re Su Te
Star sequence

Bta-Mir-23-P3_5p*
mirBase accessionNone
Sequence 
0- GGGGUUCCUGGGGAUGGGAUUU -22
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Mature sequence

Bta-Mir-23-P3_3p
mirBase accessionMIMAT0003827
Sequence 
36- AUCACAUUGCCAGGGAUUUCCAA -59
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Proposed targets TargetScanVert: bta-miR-23a