MirGeneDB 3.0
MirGeneDB ID

Bta-Mir-181-P1c

Family name MIR-181 (all species)
Species Cow (Bos taurus)
MiRBase ID bta-mir-181c
Paralogues Bta-Mir-181-P1a  Bta-Mir-181-P1b  Bta-Mir-181-P2a  Bta-Mir-181-P2b  Bta-Mir-181-P2c 
Orthologues Aca-Mir-181-P1c  Ami-Mir-181-P1c  Cfa-Mir-181-P1c  Cja-Mir-181-P1c  Cmi-Mir-181-P1c  Cpi-Mir-181-P1c  Cpo-Mir-181-P1c  Dno-Mir-181-P1c  Dre-Mir-181-P1c1  Dre-Mir-181-P1c2  Eca-Mir-181-P1c  Ete-Mir-181-P1c  Gja-Mir-181-P1c  Gmo-Mir-181-P1c1  Gmo-Mir-181-P1c2  Hsa-Mir-181-P1c  Laf-Mir-181-P1c  Lch-Mir-181-P1c  Loc-Mir-181-P1c  Mal-Mir-181-P1c1  Mal-Mir-181-P1c2  Mdo-Mir-181-P1c  Mml-Mir-181-P1c  Mmr-Mir-181-P1c  Mmu-Mir-181-P1c  Mun-Mir-181-P1c  Neu-Mir-181-P1c  Oan-Mir-181-P1c  Ocu-Mir-181-P1c  Pab-Mir-181-P1c  Pbv-Mir-181-P1c  Rno-Mir-181-P1c  Sha-Mir-181-P1c  Spt-Mir-181-P1c  Sto-Mir-181-P1c  Tni-Mir-181-P1c1  Tni-Mir-181-P1c2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037334.1: 11811475-11811535 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-181-P1c)		 Mir-181-P2c NC_037334.1: 11811294-11811353 [-] UCSC Ensembl
Mir-181-P1c NC_037334.1: 11811475-11811535 [-] UCSC Ensembl
Mir-23-P3 NC_037334.1: 11838711-11838769 [+] UCSC Ensembl
Mir-27-P3 NC_037334.1: 11838890-11838950 [+] UCSC Ensembl
Mir-24-P3 NC_037334.1: 11839043-11839102 [+] UCSC Ensembl
Seed ACAUUCA
Precursor
(pre-Mir +30nt flank)		 
CCCCCCAAGGAGUUGCCAAGGGUUUGGGGGAACAUUCAACCUGUCGGUGAGUUUGGGCAGCUCAGGCAAACCAUCGACCGUUGAGUGGACCCCGAGGCCUGGAACUGCCGUCCACCCACCC
Get precursor sequence
Structure
        10          20        30        40        50        60 
CCCCCCAAGGAGUUGCCAA--|     G    AA        CU       A   UGGGCAG 
                     GGGUUU GGGG  CAUUCAAC  GUCGGUG GUU       \
                     UCCGGA CCCC  GUGAGUUG  CAGCUAC CAA       C
CCCACCCACCUGCCGUCAAGG^     G    AG        C-       -   ACGGACU 
 .       110       100        90        80          70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-181-P1c_5p
mirBase accessionMIMAT0003817
Sequence 
0- AACAUUCAACCUGUCGGUGAGUU -23
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Proposed targets TargetScanVert: bta-miR-181c
Star sequence

Bta-Mir-181-P1c_3p*
mirBase accessionNone
Sequence 
39- ACCAUCGACCGUUGAGUGGACC -61
Get sequence