MirGeneDB 3.0
MirGeneDB ID

Bta-Mir-181-P1b

Family name MIR-181 (all species)
Species Cow (Bos taurus)
MiRBase ID bta-mir-181a-2
Paralogues Bta-Mir-181-P1a  Bta-Mir-181-P1c  Bta-Mir-181-P2a  Bta-Mir-181-P2b  Bta-Mir-181-P2c 
Orthologues Aca-Mir-181-P1b  Ami-Mir-181-P1b  Cfa-Mir-181-P1b  Cja-Mir-181-P1b  Cli-Mir-181-P1b  Cmi-Mir-181-P1b  Cpi-Mir-181-P1b  Cpo-Mir-181-P1b  Dno-Mir-181-P1b  Dre-Mir-181-P1b2  Eca-Mir-181-P1b  Ete-Mir-181-P1b  Gga-Mir-181-P1b  Gja-Mir-181-P1b  Gmo-Mir-181-P1b2  Hsa-Mir-181-P1b  Laf-Mir-181-P1b  Lch-Mir-181-P1b  Loc-Mir-181-P1b  Mal-Mir-181-P1b2  Mdo-Mir-181-P1b  Mml-Mir-181-P1b  Mmr-Mir-181-P1b  Mmu-Mir-181-P1b  Mun-Mir-181-P1b  Neu-Mir-181-P1b  Oan-Mir-181-P1b  Ocu-Mir-181-P1b  Pab-Mir-181-P1b  Pbv-Mir-181-P1b  Rno-Mir-181-P1b  Sha-Mir-181-P1b  Spt-Mir-181-P1b  Sto-Mir-181-P1b  Tgu-Mir-181-P1b  Tni-Mir-181-P1b1  Xla-Mir-181-P1b3  Xla-Mir-181-P1b4  Xtr-Mir-181-P1b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037338.1: 95709011-95709070 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-181-P1b)		 Mir-181-P1b NC_037338.1: 95709011-95709070 [+] UCSC Ensembl
Mir-181-P2b NC_037338.1: 95710203-95710262 [+] UCSC Ensembl
Seed ACAUUCA
Precursor
(pre-Mir +30nt flank)		 
CCAGGACCCAGUCUUCAGAGGACUCCAAGGAACAUUCAACGCUGUCGGUGAGUUUGGGAUUUGAAAAAACCACCGACCGUUGACUGUACCUUGGGUUCCUUACAGACAACACUAUAUUUC
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Structure
        10          20        30        40        50        60 
CCAGGACCCAGUCUUCA--|    CU      A   U      CU       A  UUGGGAU 
                   GAGGA  CCAAGG ACA UCAACG  GUCGGUG GU       \
                   UUCCU  GGUUCC UGU AGUUGC  CAGCCAC CA       U
CUUUAUAUCACAACAGACA^    UG      A   C      --       -  AAAAAGU 
.       110       100        90        80           70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-181-P1b_5p
mirBase accessionMIMAT0003543
Sequence 
0- AACAUUCAACGCUGUCGGUGAGU -23
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Proposed targets TargetScanVert: bta-miR-181a
Star sequence

Bta-Mir-181-P1b_3p*
mirBase accessionNone
Sequence 
38- ACCACCGACCGUUGACUGUACC -60
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