Mir-181-P1b

MirGeneDB ID

Mml-Mir-181-P1b

Family name

MIR-181 (all species)

Species

Rhesus monkey (Macaca mulatta)

MiRBase ID

mml-mir-181a-2

Paralogues

Mml-Mir-181-P1a Mml-Mir-181-P1c Mml-Mir-181-P2a Mml-Mir-181-P2b Mml-Mir-181-P2c

Orthologues

Aca-Mir-181-P1b Ami-Mir-181-P1b Bta-Mir-181-P1b Cfa-Mir-181-P1b Cja-Mir-181-P1b Cli-Mir-181-P1b Cmi-Mir-181-P1b Cpi-Mir-181-P1b Cpo-Mir-181-P1b Dno-Mir-181-P1b Dre-Mir-181-P1b2 Eca-Mir-181-P1b Ete-Mir-181-P1b Gga-Mir-181-P1b Gja-Mir-181-P1b Gmo-Mir-181-P1b2 Hsa-Mir-181-P1b Laf-Mir-181-P1b Lch-Mir-181-P1b Loc-Mir-181-P1b Mal-Mir-181-P1b2 Mdo-Mir-181-P1b Mmr-Mir-181-P1b Mmu-Mir-181-P1b Mun-Mir-181-P1b Neu-Mir-181-P1b Oan-Mir-181-P1b Ocu-Mir-181-P1b Pab-Mir-181-P1b Pbv-Mir-181-P1b Rno-Mir-181-P1b Sha-Mir-181-P1b Spt-Mir-181-P1b Sto-Mir-181-P1b Tgu-Mir-181-P1b Tni-Mir-181-P1b1 Xla-Mir-181-P1b3 Xla-Mir-181-P1b4 Xtr-Mir-181-P1b

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Vertebrata

Genome context
(GCA_003339765.3_Mmul_10_traces)

CM014350.1: 15981797-15981856 [-] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-181-P1b)

Mir-181-P2b CM014350.1: 15980574-15980633 [-] UCSC Ensembl
Mir-181-P1b CM014350.1: 15981797-15981856 [-] UCSC Ensembl

Seed

ACAUUCA

Precursor
(pre-Mir +30nt flank)

UAUCAGGCCAGCCUUCAGAGGACUCCAAGGAACAUUCAACGCUGUCGGUGAGUUUGGGAUUUGAAAAAACCACUGACCGUUGACUGUACCUCGGGGUCCUUACAGACGACACUACAUUUC

Get precursor sequence

Structure

        10          20        30        40        50        60 
UAUCAGGCCAGCCUUCA--|        A   A   U      CU       A  UUGGGAU 
                   GAGGACUCC AGG ACA UCAACG  GUCGGUG GU       \
                   UUCCUGGGG UCC UGU AGUUGC  CAGUCAC CA       U
CUUUACAUCACAGCAGACA^        C   A   C      --       -  AAAAAGU 
.       110       100        90        80           70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Bo	Br	Br	Br	He	Ki	Li	Lu	Ly	Sk	Sp	Te	Th

Mature sequence

Mml-Mir-181-P1b_5p

mirBase accession

MIMAT0002506

Sequence

0- AACAUUCAACGCUGUCGGUGAGU -23

Get sequence

Proposed targets

TargetScanVert: mml-miR-181a-5p

Star sequence

Mml-Mir-181-P1b_3p*

mirBase accession

None

Sequence

38- ACCACUGACCGUUGACUGUACC -60

Get sequence