MirGeneDB 3.0

MirGeneDB ID

Mml-Mir-181-P2b

Family name MIR-181 (all species)
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-181b-2
Paralogues Mml-Mir-181-P1a  Mml-Mir-181-P1b  Mml-Mir-181-P1c  Mml-Mir-181-P2a  Mml-Mir-181-P2c 
Orthologues Aca-Mir-181-P2b  Ami-Mir-181-P2b  Bta-Mir-181-P2b  Cfa-Mir-181-P2b  Cja-Mir-181-P2b  Cli-Mir-181-P2b  Cmi-Mir-181-P2b  Cpi-Mir-181-P2b  Cpo-Mir-181-P2b  Dno-Mir-181-P2b  Dre-Mir-181-P2b2  Eca-Mir-181-P2b  Ete-Mir-181-P2b  Gga-Mir-181-P2b  Gja-Mir-181-P2b  Gmo-Mir-181-P2b2  Hsa-Mir-181-P2b  Laf-Mir-181-P2b  Lch-Mir-181-P2b  Loc-Mir-181-P2b  Mal-Mir-181-P2b2  Mdo-Mir-181-P2b  Mmr-Mir-181-P2b  Mmu-Mir-181-P2b  Mun-Mir-181-P2b  Neu-Mir-181-P2b  Oan-Mir-181-P2b  Ocu-Mir-181-P2b  Pab-Mir-181-P2b  Pbv-Mir-181-P2b  Rno-Mir-181-P2b  Sha-Mir-181-P2b  Spt-Mir-181-P2b  Sto-Mir-181-P2b  Tgu-Mir-181-P2b  Tni-Mir-181-P2b1  Xla-Mir-181-P2b3  Xla-Mir-181-P2b4  Xtr-Mir-181-P2b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_003339765.3_Mmul_10_traces)
CM014350.1: 15980574-15980633 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-181-P2b)
Mir-181-P2b CM014350.1: 15980574-15980633 [-] UCSC Ensembl
Mir-181-P1b CM014350.1: 15981797-15981856 [-] UCSC Ensembl
Seed ACAUUCA
Precursor
(pre-Mir +30nt flank)
CACCAACUGAAAACACUGAUGGCUGCACUCAACAUUCAUUGCUGUCGGUGGGUUUGAGUCUGAAUCAACUCACUGAUCGAUGAAUGCAAACUGCGGACCAAACAACCCAAAGGAAGCAAA
Get precursor sequence
Structure
        10         20         30        40        50        60
CACCAACUGAAAACACUGA-   -|    CUCAA         CU           UGAGU 
                    UGG CUGCA     CAUUCAUUG  GUCGGUGGGUU     C
                    ACC GGCGU     GUAAGUAGC  UAGUCACUCAA     U
AAACGAAGGAAACCCAACAA   A^    CAAAC         --           CUAAG 
.       110       100        90        80          70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Mature sequence

Mml-Mir-181-P2b_5p

mirBase accessionMIMAT0002623
Sequence
0- AACAUUCAUUGCUGUCGGUGGGUU -24
Get sequence
Proposed targets TargetScanVert: mml-miR-181b-5p
Star sequence

Mml-Mir-181-P2b_3p*

mirBase accessionMIMAT0031042
Sequence
38- CUCACUGAUCGAUGAAUGCAAA -60
Get sequence
Proposed targets TargetScanVert: mml-miR-181b-2-3p