MirGeneDB 3.0
MirGeneDB ID

Cmi-Mir-181-P2b

Family name MIR-181 (all species)
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-181-P1a  Cmi-Mir-181-P1b  Cmi-Mir-181-P1c  Cmi-Mir-181-P2a  Cmi-Mir-181-P2c 
Orthologues Aca-Mir-181-P2b  Ami-Mir-181-P2b  Bta-Mir-181-P2b  Cfa-Mir-181-P2b  Cja-Mir-181-P2b  Cli-Mir-181-P2b  Cpi-Mir-181-P2b  Cpo-Mir-181-P2b  Dno-Mir-181-P2b  Dre-Mir-181-P2b2  Eca-Mir-181-P2b  Ete-Mir-181-P2b  Gga-Mir-181-P2b  Gja-Mir-181-P2b  Gmo-Mir-181-P2b2  Hsa-Mir-181-P2b  Laf-Mir-181-P2b  Lch-Mir-181-P2b  Loc-Mir-181-P2b  Mal-Mir-181-P2b2  Mdo-Mir-181-P2b  Mml-Mir-181-P2b  Mmr-Mir-181-P2b  Mmu-Mir-181-P2b  Mun-Mir-181-P2b  Neu-Mir-181-P2b  Oan-Mir-181-P2b  Ocu-Mir-181-P2b  Pab-Mir-181-P2b  Pbv-Mir-181-P2b  Rno-Mir-181-P2b  Sha-Mir-181-P2b  Spt-Mir-181-P2b  Sto-Mir-181-P2b  Tgu-Mir-181-P2b  Tni-Mir-181-P2b1  Xla-Mir-181-P2b3  Xla-Mir-181-P2b4  Xtr-Mir-181-P2b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI636038.1: 923264-923325 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-181-P2b)		 Mir-181-P2b KI636038.1: 923264-923325 [-] UCSC Ensembl
Mir-181-P1b KI636038.1: 924893-924955 [-] UCSC Ensembl
Seed ACAUUCA
Precursor
(pre-Mir +30nt flank)		 
AUCCAACACUUGUAUCAAAAGGUUGCAAUAAACAUUCAUUGCUGUCGGUGGGUUUUUAAUUUUUGAGCAACUCACUGAUCAGUGAAUGCAAACUGCAGCCCCAAAAUCACCAUUUUGUGCAC
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Structure
        10        20          30        40        50        60 
AUCCAACACUUGUAUCAAAA--|      AUAAA         CU           UUUAAU 
                      GGUUGCA     CAUUCAUUG  GUCGGUGGGUU      U
                      CCGACGU     GUAAGUGAC  UAGUCACUCAA      U
CACGUGUUUUACCACUAAAACC^      CAAAC         --           CGAGUU 
120       110       100        90        80          70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
Bl Br Ey Gi He In Ki Li Mu Ov Pa Re Sk Sp Te Ut
Mature sequence

Cmi-Mir-181-P2b_5p
mirBase accessionNone
Sequence 
0- AACAUUCAUUGCUGUCGGUGGGUU -24
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Star sequence

Cmi-Mir-181-P2b_3p* (predicted)
mirBase accessionNone
Sequence 
40- CUCACUGAUCAGUGAAUGCAAA -62
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