MirGeneDB 2.1
MirGeneDB ID

Ocu-Mir-181-P2b

Family name MIR-181 (all species)
Seed ACAUUCA
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-181b-2
Paralogues Ocu-Mir-181-P1a  Ocu-Mir-181-P1b  Ocu-Mir-181-P1c  Ocu-Mir-181-P2a  Ocu-Mir-181-P2c 
Orthologues Aca-Mir-181-P2b  Ami-Mir-181-P2b  Bta-Mir-181-P2b  Cfa-Mir-181-P2b  Cli-Mir-181-P2b  Cmi-Mir-181-P2b  Cpi-Mir-181-P2b  Cpo-Mir-181-P2b  Dno-Mir-181-P2b  Dre-Mir-181-P2b2  Ete-Mir-181-P2b  Gga-Mir-181-P2b  Gja-Mir-181-P2b  Gmo-Mir-181-P2b2  Hsa-Mir-181-P2b  Lch-Mir-181-P2b  Loc-Mir-181-P2b  Mal-Mir-181-P2b2  Mdo-Mir-181-P2b  Mml-Mir-181-P2b  Mmu-Mir-181-P2b  Mun-Mir-181-P2b  Oan-Mir-181-P2b  Pbv-Mir-181-P2b  Rno-Mir-181-P2b  Sha-Mir-181-P2b  Spt-Mir-181-P2b  Sto-Mir-181-P2b  Tgu-Mir-181-P2b  Tni-Mir-181-P2b1  Xla-Mir-181-P2b3  Xla-Mir-181-P2b4  Xtr-Mir-181-P2b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(oryCun2_add)		 chrUn0001: 2613453-2613512 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-181-P2b)		 Mir-181-P2b chrUn0001: 2613453-2613512 [-] UCSC Ensembl
Mir-181-P1b chrUn0001: 2614666-2614725 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAACAACUGGAAACACUGAUGGCUGCACUCAACAUUCAUUGCUGUCGGUGGGUUUGAGUGCAAAUCAACUCACUGAUCAAUGAAUGCAAACUGCGGACCAAACAACCCAAGGAGGCAAAA
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Structure
        10         20         30        40        50        60
CAACAACUGGAAACACUGA-   -|    CUCAA         CU           UGAGU 
                    UGG CUGCA     CAUUCAUUG  GUCGGUGGGUU     G
                    ACC GGCGU     GUAAGUAAC  UAGUCACUCAA     C
AAAACGGAGGAACCCAACAA   A^    CAAAC         --           CUAAA 
.       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
He Ki Te To Wh
Mature sequence

Ocu-Mir-181-P2b_5p
mirBase accessionMIMAT0048278
Sequence 
0- AACAUUCAUUGCUGUCGGUGGGUU -24
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Star sequence

Ocu-Mir-181-P2b_3p*
mirBase accessionMIMAT0048280
Sequence 
38- CUCACUGAUCAAUGAAUGCAAA -60
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