MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-181-P2b

Family name MIR-181 (all species)
Species Horse (Equus caballus)
MiRBase ID eca-mir-181b
Paralogues Eca-Mir-181-P1a  Eca-Mir-181-P1b  Eca-Mir-181-P1c  Eca-Mir-181-P2a  Eca-Mir-181-P2c 
Orthologues Aca-Mir-181-P2b  Ami-Mir-181-P2b  Bta-Mir-181-P2b  Cfa-Mir-181-P2b  Cja-Mir-181-P2b  Cli-Mir-181-P2b  Cmi-Mir-181-P2b  Cpi-Mir-181-P2b  Cpo-Mir-181-P2b  Dno-Mir-181-P2b  Dre-Mir-181-P2b2  Ete-Mir-181-P2b  Gga-Mir-181-P2b  Gja-Mir-181-P2b  Gmo-Mir-181-P2b2  Hsa-Mir-181-P2b  Laf-Mir-181-P2b  Lch-Mir-181-P2b  Loc-Mir-181-P2b  Mal-Mir-181-P2b2  Mdo-Mir-181-P2b  Mml-Mir-181-P2b  Mmr-Mir-181-P2b  Mmu-Mir-181-P2b  Mun-Mir-181-P2b  Neu-Mir-181-P2b  Oan-Mir-181-P2b  Ocu-Mir-181-P2b  Pab-Mir-181-P2b  Pbv-Mir-181-P2b  Rno-Mir-181-P2b  Sha-Mir-181-P2b  Spt-Mir-181-P2b  Sto-Mir-181-P2b  Tgu-Mir-181-P2b  Tni-Mir-181-P2b1  Xla-Mir-181-P2b3  Xla-Mir-181-P2b4  Xtr-Mir-181-P2b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009172.1: 29261301-29261360 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-181-P2b)		 Mir-181-P1b CM009172.1: 29260045-29260104 [+] UCSC Ensembl
Mir-181-P2b CM009172.1: 29261301-29261360 [+] UCSC Ensembl
Seed ACAUUCA
Precursor
(pre-Mir +30nt flank)		 
CACCAAAUGGAAACACUGAUGGCUGCACUCAACAUUCAUUGCUGUCGGUGGGUUUGAGUCUGAAUCAACUCACUGAUCAAUGAAUGCAAACUGCGGACCAAACAACCUAAGAGAACCAAA
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Structure
        10         20         30        40        50        60
CACCAAAUGGAAACACUGA-   -|    CUCAA         CU           UGAGU 
                    UGG CUGCA     CAUUCAUUG  GUCGGUGGGUU     C
                    ACC GGCGU     GUAAGUAAC  UAGUCACUCAA     U
AAACCAAGAGAAUCCAACAA   A^    CAAAC         --           CUAAG 
.       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Mature sequence

Eca-Mir-181-P2b_5p
mirBase accessionMIMAT0013179
Sequence 
0- AACAUUCAUUGCUGUCGGUGGGUU -24
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Star sequence

Eca-Mir-181-P2b_3p*
mirBase accessionNone
Sequence 
38- CUCACUGAUCAAUGAAUGCAAA -60
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