MirGeneDB 3.0
MirGeneDB ID

Bta-Mir-181-P1a

Family name MIR-181 (all species)
Species Cow (Bos taurus)
MiRBase ID bta-mir-181a-1
Paralogues Bta-Mir-181-P1b  Bta-Mir-181-P1c  Bta-Mir-181-P2a  Bta-Mir-181-P2b  Bta-Mir-181-P2c 
Orthologues Aca-Mir-181-P1a  Ami-Mir-181-P1a  Cfa-Mir-181-P1a  Cja-Mir-181-P1a  Cli-Mir-181-P1a  Cmi-Mir-181-P1a  Cpi-Mir-181-P1a  Cpo-Mir-181-P1a  Dno-Mir-181-P1a  Dre-Mir-181-P1a1  Dre-Mir-181-P1a2  Eca-Mir-181-P1a  Ete-Mir-181-P1a  Gga-Mir-181-P1a  Gja-Mir-181-P1a  Gmo-Mir-181-P1a1  Hsa-Mir-181-P1a  Laf-Mir-181-P1a  Lch-Mir-181-P1a  Loc-Mir-181-P1a  Mal-Mir-181-P1a1  Mdo-Mir-181-P1a  Mml-Mir-181-P1a  Mmr-Mir-181-P1a  Mmu-Mir-181-P1a  Mun-Mir-181-P1a  Neu-Mir-181-P1a  Oan-Mir-181-P1a  Ocu-Mir-181-P1a  Pab-Mir-181-P1a  Rno-Mir-181-P1a  Sha-Mir-181-P1a  Spt-Mir-181-P1a  Sto-Mir-181-P1a  Tgu-Mir-181-P1a  Tni-Mir-181-P1a1  Xla-Mir-181-P1a3  Xla-Mir-181-P1a4  Xtr-Mir-181-P1a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037343.1: 77762860-77762922 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-181-P1a)		 Mir-181-P2a NC_037343.1: 77762678-77762738 [-] UCSC Ensembl
Mir-181-P1a NC_037343.1: 77762860-77762922 [-] UCSC Ensembl
Seed ACAUUCA
Precursor
(pre-Mir +30nt flank)		 
AGAAUUCUGAGCUCCGAGGUUGCUUCAGUGAACAUUCAACGCUGUCGGUGAGUUUGGAAUUAAAAAUCAAAACCAUCGACCGUUGAUUGUACCCUAUGGCCAACCACCAUCUCCACCCGUGGC
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Structure
        10         20         30        40        50        60  
AGAAUUCUGAGCUCCGA-    -|  UC  UGA   U      CU       A  UUGGAAUU 
                  GGUU GCU  AG   ACA UCAACG  GUCGGUG GU        A
                  CCAA CGG  UC   UGU AGUUGC  CAGCUAC CA        A
CGGUGCCCACCUCUACCA    C^  UA  CCA   U      --       -  AAACUAAA 
 120       110       100        90          80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-181-P1a_5p
mirBase accessionMIMAT0003543
Sequence 
0- AACAUUCAACGCUGUCGGUGAGU -23
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Proposed targets TargetScanVert: bta-miR-181a
Star sequence

Bta-Mir-181-P1a_3p*
mirBase accessionNone
Sequence 
41- ACCAUCGACCGUUGAUUGUACC -63
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