MirGeneDB 2.1

MirGeneDB ID

Mun-Mir-181-P1a

Family name MIR-181 (all species)
Seed ACAUUCA
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues Mun-Mir-181-P1b  Mun-Mir-181-P1c  Mun-Mir-181-P2a  Mun-Mir-181-P2b  Mun-Mir-181-P2c 
Orthologues Aca-Mir-181-P1a  Ami-Mir-181-P1a  Bta-Mir-181-P1a  Cfa-Mir-181-P1a  Cli-Mir-181-P1a  Cmi-Mir-181-P1a  Cpi-Mir-181-P1a  Cpo-Mir-181-P1a  Dno-Mir-181-P1a  Dre-Mir-181-P1a1  Dre-Mir-181-P1a2  Ete-Mir-181-P1a  Gga-Mir-181-P1a  Gja-Mir-181-P1a  Gmo-Mir-181-P1a1  Hsa-Mir-181-P1a  Lch-Mir-181-P1a  Loc-Mir-181-P1a  Mal-Mir-181-P1a1  Mdo-Mir-181-P1a  Mml-Mir-181-P1a  Mmu-Mir-181-P1a  Oan-Mir-181-P1a  Ocu-Mir-181-P1a  Rno-Mir-181-P1a  Sha-Mir-181-P1a  Spt-Mir-181-P1a  Sto-Mir-181-P1a  Tgu-Mir-181-P1a  Tni-Mir-181-P1a1  Xla-Mir-181-P1a3  Xla-Mir-181-P1a4  Xtr-Mir-181-P1a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(Mun_miRNA_loci)
181-P1a_LR594637.1:101574127-101574266: 40-101 [-]
Precursor
(pre-Mir +30nt flank)
UGCACUCUUGUUUUAGUGGUUGCUGUGGUGAACAUUCAACGCUGUCGGUGAGUUUGAGAAUAAAGUGUAAACUAUCGACCGUUGACUGUACCCUACAGUUUACUUUCAGCUUCUCCCUUCGU
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Structure
        10         20         30        40        50        60  
UGCACUCUUGUUUUAGU-   U-|      UGA   U      CU      G   UUGAGAAU 
                  GGU  GCUGUGG   ACA UCAACG  GUCGGU AGU        \
                  UCA  UGACAUC   UGU AGUUGC  CAGCUA UCA        A
UGCUUCCCUCUUCGACUU   UU^      CCA   C      --      -   AAUGUGAA 
120       110       100        90        80           70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Mun-Mir-181-P1a_5p

mirBase accessionNone
Sequence
0- AACAUUCAACGCUGUCGGUGAGU -23
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Star sequence

Mun-Mir-181-P1a_3p*

mirBase accessionNone
Sequence
40- ACUAUCGACCGUUGACUGUACC -62
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