MirGeneDB 3.0
MirGeneDB ID

Gga-Mir-181-P1a

Family name MIR-181 (all species)
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-181a-1
Paralogues Gga-Mir-181-P1b  Gga-Mir-181-P2a  Gga-Mir-181-P2b 
Orthologues Aca-Mir-181-P1a  Ami-Mir-181-P1a  Bta-Mir-181-P1a  Cfa-Mir-181-P1a  Cja-Mir-181-P1a  Cli-Mir-181-P1a  Cmi-Mir-181-P1a  Cpi-Mir-181-P1a  Cpo-Mir-181-P1a  Dno-Mir-181-P1a  Dre-Mir-181-P1a1  Dre-Mir-181-P1a2  Eca-Mir-181-P1a  Ete-Mir-181-P1a  Gja-Mir-181-P1a  Gmo-Mir-181-P1a1  Hsa-Mir-181-P1a  Laf-Mir-181-P1a  Lch-Mir-181-P1a  Loc-Mir-181-P1a  Mal-Mir-181-P1a1  Mdo-Mir-181-P1a  Mml-Mir-181-P1a  Mmr-Mir-181-P1a  Mmu-Mir-181-P1a  Mun-Mir-181-P1a  Neu-Mir-181-P1a  Oan-Mir-181-P1a  Ocu-Mir-181-P1a  Pab-Mir-181-P1a  Rno-Mir-181-P1a  Sha-Mir-181-P1a  Spt-Mir-181-P1a  Sto-Mir-181-P1a  Tgu-Mir-181-P1a  Tni-Mir-181-P1a1  Xla-Mir-181-P1a3  Xla-Mir-181-P1a4  Xtr-Mir-181-P1a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(Gallus_gallus.GRCg6a)		 8: 2387159-2387220 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-181-P1a)		 Mir-181-P1a 8: 2387159-2387220 [+] UCSC Ensembl
Mir-181-P2a 8: 2387343-2387402 [+] UCSC Ensembl
Seed ACAUUCA
Precursor
(pre-Mir +30nt flank)		 
UGGAGUUCUCUUGUAGUGGUUGCUUCAGUGAACAUUCAACGCUGUCGGUGAGUUUGGAAUUUAAGUGAAAACCAUCGACCGUUGAUUGUACCCUCCAGCUAACCAUCCUCCUCCUUACUUCA
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Structure
        10         20         30        40        50        60  
UGGAGUUCUCUUGUAGU-    -|  UC  UGA   U      CU       A  UUGGAAUU 
                  GGUU GCU  AG   ACA UCAACG  GUCGGUG GU        \
                  CCAA CGA  UC   UGU AGUUGC  CAGCUAC CA        U
ACUUCAUUCCUCCUCCUA    U^  CC  CCA   U      --       -  AAAGUGAA 
120       110       100        90        80           70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Mature sequence

Gga-Mir-181-P1a_5p
mirBase accessionMIMAT0001168
Sequence 
0- AACAUUCAACGCUGUCGGUGAGU -23
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Proposed targets TargetScanVert: gga-miR-181a-5p
miRDB: MIMAT0001168
Star sequence

Gga-Mir-181-P1a_3p*
mirBase accessionMIMAT0001150
Sequence 
40- ACCAUCGACCGUUGAUUGUACC -62
Get sequence
Proposed targets TargetScanVert: gga-miR-181a-3p
miRDB: MIMAT0001150