MirGeneDB 3.0
103 microRNA genes with seed UCACAUU
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Pma-Mir-23-o1 pma-mir-23a MIR-23 UCACAUU MIMAT0019402 MIMAT0019403 NC_046103.1 7155810 7155873 - P. marinus Vertebrata No 1 1
Pma-Mir-23-o2 pma-mir-23b MIR-23 UCACAUU None MIMAT0019404 NC_046069.1 795034 795099 - P. marinus Vertebrata No 1
Dre-Mir-23-P1 dre-mir-23a-3 MIR-23 UCACAUU MIMAT0031945 MIMAT0001790 chr2 33900445 33900503 + Gnathostomata Vertebrata No 1
Gmo-Mir-23-P1 gmo-mir-23a-2 MIR-23 UCACAUU MIMAT0044004 MIMAT0044005 contig135158 805 865 - Gnathostomata Vertebrata No 1 1 1
Lch-Mir-23-P1 None MIR-23 UCACAUU None None JH126762.1 1811296 1811360 - Gnathostomata Vertebrata Unknown 1
Loc-Mir-23-P1 None MIR-23 UCACAUU None None LG10 2478694 2478751 - Gnathostomata Vertebrata No 1
Mal-Mir-23-P1 None MIR-23 UCACAUU None None KV884702.1 3700621 3700681 + Gnathostomata Vertebrata No 1
Sto-Mir-23-P1 None MIR-23 UCACAUU None None BFAA01002570.1 222579 222638 - Gnathostomata Vertebrata No 1
Tni-Mir-23-P1 tni-mir-23a-2 MIR-23 UCACAUU None MIMAT0002913 15_random 3094562 3094622 - Gnathostomata Vertebrata No
Aca-Mir-23-P2 aca-mir-23b MIR-23 UCACAUU MIMAT0021897 MIMAT0021898 2 40592005 40592064 - Gnathostomata Vertebrata Yes 1 1
Ami-Mir-23-P2 ami-mir-23b MIR-23 UCACAUU MIMAT0038059 MIMAT0038060 NW_017713772.1 16892980 16893039 - Gnathostomata Vertebrata Yes 1 1 1
Bta-Mir-23-P2 bta-mir-23b MIR-23 UCACAUU MIMAT0012538 MIMAT0003852 NC_037335.1 81617032 81617091 + Gnathostomata Vertebrata Yes 1 1 1
Cfa-Mir-23-P2 cfa-mir-23b MIR-23 UCACAUU None MIMAT0006612 chr1 71678349 71678408 - Gnathostomata Vertebrata Yes 1 1 1
Cja-Mir-23-P2 None MIR-23 UCACAUU None None CM021915.1 77750086 77750145 + Gnathostomata Vertebrata Yes 1 1 1
Cli-Mir-23-P2 cli-mir-23b MIR-23 UCACAUU MIMAT0038440 MIMAT0038441 scaffold226 156772 156831 + Gnathostomata Vertebrata Yes 1 1 1
Cmi-Mir-23-P2 None MIR-23 UCACAUU None None KI635929.1 195324 195383 + Gnathostomata Vertebrata No 1 1 1
Cpi-Mir-23-P2 cpi-mir-23b MIR-23 UCACAUU None MIMAT0037656 JH584764 1109160 1109219 - Gnathostomata Vertebrata Yes 1 1 1
Cpo-Mir-23-P2 cpo-mir-23b MIR-23 UCACAUU MIMAT0046878 MIMAT0046879 scaffold_42 4055809 4055868 - Gnathostomata Vertebrata No 1 1 1
Dno-Mir-23-P2 dno-mir-23b MIR-23 UCACAUU MIMAT0047530 MIMAT0047531 JH570415 2090017 2090076 + Gnathostomata Vertebrata No 1 1
Eca-Mir-23-P2 eca-mir-23b MIR-23 UCACAUU None MIMAT0013113 CM009170.1 2132617 2132676 - Gnathostomata Vertebrata Yes 1 1 1
Ete-Mir-23-P2 None MIR-23 UCACAUU None None JH980384 3445646 3445705 - Gnathostomata Vertebrata Yes 1 1 1
Gga-Mir-23-P2 gga-mir-23b MIR-23 UCACAUU MIMAT0026546 MIMAT0001186 Z 41660640 41660699 + Gnathostomata Vertebrata Yes 1 1 1
Gja-Mir-23-P2 None MIR-23 UCACAUU None None NW_015167066.1 326843 326902 + Gnathostomata Vertebrata Yes 1 1 1
Hsa-Mir-23-P2 hsa-mir-23b MIR-23 UCACAUU MIMAT0004587 MIMAT0000418 chr9 95085227 95085287 + Gnathostomata Vertebrata Yes 1 1
Laf-Mir-23-P2 None MIR-23 UCACAUU None None GL010033.1 2906310 2906369 - Gnathostomata Vertebrata Unknown 1 1 1
Lch-Mir-23-P2 None MIR-23 UCACAUU None None JH126823.1 177079 177138 - Gnathostomata Vertebrata Unknown 1 1 1
Loc-Mir-23-P2 None MIR-23 UCACAUU None None LG2 32741925 32741983 - Gnathostomata Vertebrata No 1 1 1
Mdo-Mir-23-P2 mdo-mir-23b MIR-23 UCACAUU MIMAT0026713 MIMAT0004176 6 17695908 17695968 + Gnathostomata Vertebrata Yes 1 1
Mml-Mir-23-P2 mml-mir-23b MIR-23 UCACAUU MIMAT0026800 MIMAT0006165 CM014350.1 112742491 112742551 - Gnathostomata Vertebrata Yes 1 1
Mmr-Mir-23-P2 mmr-mir-23b MIR-23 UCACAUU None MIMAT0049228 CM007670.1 10485648 10485708 + Gnathostomata Vertebrata Yes 1 1
Mmu-Mir-23-P2 mmu-mir-23b MIR-23 UCACAUU MIMAT0016980 MIMAT0000125 chr13 63300492 63300551 + Gnathostomata Vertebrata No 1 1 1
Mun-Mir-23-P2 None MIR-23 UCACAUU None None LR594633.1 206443137 206443196 - Gnathostomata Vertebrata No 1 1
Neu-Mir-23-P2 None MIR-23 UCACAUU None None CM051815.1 329062670 329062727 - Gnathostomata Vertebrata Yes 1 1
Oan-Mir-23-P2 oan-mir-23b MIR-23 UCACAUU MIMAT0006958 MIMAT0006959 NC_041753.1 69581117 69581177 + Gnathostomata Vertebrata Yes 1 1
Ocu-Mir-23-P2 ocu-mir-23b MIR-23 UCACAUU MIMAT0048128 MIMAT0048129 chr1 74102158 74102217 + Gnathostomata Vertebrata No 1 1 1
Pab-Mir-23-P2 None MIR-23 UCACAUU None None CM054692.2 86215440 86215500 + Gnathostomata Vertebrata Yes 1 1
Pbv-Mir-23-P2 pbv-mir-23b MIR-23 UCACAUU MIMAT0038854 MIMAT0038855 KE954626.1 204684 204743 + Gnathostomata Vertebrata Yes 1 1 1
Rno-Mir-23-P2 rno-mir-23b MIR-23 UCACAUU MIMAT0017099 MIMAT0000793 chr17 823242 823301 + Gnathostomata Vertebrata Yes 1 1 1
Sha-Mir-23-P2 sha-mir-23b MIR-23 UCACAUU None MIMAT0022788 GL841474.1 1159875 1159934 + Gnathostomata Vertebrata Yes 1 1
Spt-Mir-23-P2 None MIR-23 UCACAUU None None QEPC01008874.1 6802779 6802838 + Gnathostomata Vertebrata Unknown 1 1 1
Sto-Mir-23-P2 None MIR-23 UCACAUU None None BFAA01002700.1 246394 246453 - Gnathostomata Vertebrata No 1 1 1
Tgu-Mir-23-P2 tgu-mir-23 MIR-23 UCACAUU MIMAT0014644 MIMAT0014566 Z 10609383 10609442 - Gnathostomata Vertebrata Yes 1 1 1
Xtr-Mir-23-P2 xtr-mir-23b MIR-23 UCACAUU None MIMAT0003673 chr1 123463489 123463548 + Gnathostomata Vertebrata Yes 1 1
Dre-Mir-23-P2a dre-mir-23b MIR-23 UCACAUU None MIMAT0001791 chr10 15954588 15954651 + Clupeocephala Vertebrata Yes 1 1
Mal-Mir-23-P2a None MIR-23 UCACAUU None None KV884846.1 922549 922607 + Clupeocephala Vertebrata No 1 1
Dre-Mir-23-P2b dre-mir-23b-2 MIR-23 UCACAUU MIMAT0048660 MIMAT0048661 chr8 30167636 30167695 - Clupeocephala Vertebrata Yes 1 1
Gmo-Mir-23-P2b gmo-mir-23b MIR-23 UCACAUU None MIMAT0044020 contig256800 176 233 - Clupeocephala Vertebrata No 1 1 1
Mal-Mir-23-P2b None MIR-23 UCACAUU None None KV884708.1 577529 577586 + Clupeocephala Vertebrata No 1 1 1
Tni-Mir-23-P2b tni-mir-23b MIR-23 UCACAUU None MIMAT0002954 12 8516226 8516284 + Clupeocephala Vertebrata No 1 1
Xla-Mir-23-P2c None MIR-23 UCACAUU None None NC_030724.1 133828882 133828941 + X. laevis Vertebrata Yes 1 1
Xla-Mir-23-P2d None MIR-23 UCACAUU None None NC_030725.1 110864189 110864248 + X. laevis Vertebrata Yes 1 1
Aca-Mir-23-P3 aca-mir-23a MIR-23 UCACAUU MIMAT0021895 MIMAT0021896 2 29158348 29158408 - Gnathostomata Vertebrata No 1 1
Ami-Mir-23-P3 ami-mir-23a MIR-23 UCACAUU None MIMAT0038058 NW_017713323.1 200394 200456 + Gnathostomata Vertebrata No 1 1
Bta-Mir-23-P3 bta-mir-23a MIR-23 UCACAUU None MIMAT0003827 NC_037334.1 11838711 11838769 + Gnathostomata Vertebrata No 1 1
Cfa-Mir-23-P3 cfa-mir-23a MIR-23 UCACAUU None MIMAT0006640 chr20 48620332 48620390 + Gnathostomata Vertebrata No 1 1
Cja-Mir-23-P3 None MIR-23 UCACAUU None None CM021936.1 12279947 12280005 - Gnathostomata Vertebrata Yes 1 1
Cpi-Mir-23-P3 cpi-mir-23a MIR-23 UCACAUU None MIMAT0037655 JH584948 868693 868754 - Gnathostomata Vertebrata No 1 1
Cpo-Mir-23-P3 cpo-mir-23a MIR-23 UCACAUU MIMAT0046876 MIMAT0046877 scaffold_42 12931646 12931704 + Gnathostomata Vertebrata No 1 1
Dno-Mir-23-P3 dno-mir-23a MIR-23 UCACAUU MIMAT0047528 MIMAT0047529 AAGV03195862 168 226 + Gnathostomata Vertebrata Unknown 1 1
Dre-Mir-23-P3 dre-mir-23a-2 MIR-23 UCACAUU MIMAT0031944 MIMAT0001790 chr3 13406243 13406303 + Gnathostomata Vertebrata No
Eca-Mir-23-P3 eca-mir-23a MIR-23 UCACAUU None MIMAT0012986 CM009154.1 46233017 46233075 + Gnathostomata Vertebrata No 1 1
Ete-Mir-23-P3 None MIR-23 UCACAUU None None JH980397 3706134 3706192 + Gnathostomata Vertebrata No 1 1
Gja-Mir-23-P3 None MIR-23 UCACAUU None None NW_015175453.1 136216 136276 - Gnathostomata Vertebrata No
Gmo-Mir-23-P3 gmo-mir-23a-1 MIR-23 UCACAUU None MIMAT0044005 contig99852 2401 2463 + Gnathostomata Vertebrata No 1
Hsa-Mir-23-P3 hsa-mir-23a MIR-23 UCACAUU MIMAT0004496 MIMAT0000078 chr19 13836593 13836651 - Gnathostomata Vertebrata No 1 1
Laf-Mir-23-P3 None MIR-23 UCACAUU None None GL010053.1 29291074 29291132 + Gnathostomata Vertebrata Unknown 1 1
Lch-Mir-23-P3 None MIR-23 UCACAUU None None JH126758.1 380329 380387 - Gnathostomata Vertebrata Unknown 1
Mal-Mir-23-P3 None MIR-23 UCACAUU None None KV884862.1 448756 448817 + Gnathostomata Vertebrata No
Mdo-Mir-23-P3 mdo-mir-23a MIR-23 UCACAUU MIMAT0026710 MIMAT0004173 3 446525831 446525889 + Gnathostomata Vertebrata Yes 1
Mml-Mir-23-P3 mml-mir-23a MIR-23 UCACAUU MIMAT0026599 MIMAT0002752 CM014354.1 13435742 13435800 - Gnathostomata Vertebrata No 1 1
Mmr-Mir-23-P3 None MIR-23 UCACAUU None None CM007684.1 1346006 1346064 - Gnathostomata Vertebrata No 1 1
Mmu-Mir-23-P3 mmu-mir-23a MIR-23 UCACAUU MIMAT0017019 MIMAT0000532 chr8 84208527 84208585 + Gnathostomata Vertebrata No 1
Neu-Mir-23-P3 None MIR-23 UCACAUU None None CM051816.1 77146703 77146760 + Gnathostomata Vertebrata Yes 1
Oan-Mir-23-P3 oan-mir-23a MIR-23 UCACAUU MIMAT0007060 MIMAT0007061 Oan-Mir-23-P1_KAAE-bpy46e04 255 315 - Gnathostomata Vertebrata No 1
Ocu-Mir-23-P3 None MIR-23 UCACAUU None None VIYN01006261.1 192406 192464 - Gnathostomata Vertebrata No 1 1
Pab-Mir-23-P3 None MIR-23 UCACAUU None None CM054699.2 13876398 13876456 - Gnathostomata Vertebrata No 1 1
Pbv-Mir-23-P3 pbv-mir-23a MIR-23 UCACAUU None MIMAT0038853 KE953590.1 100352 100412 - Gnathostomata Vertebrata No 1 1
Rno-Mir-23-P3 rno-mir-23a MIR-23 UCACAUU MIMAT0004712 MIMAT0000792 chr19 25318591 25318649 + Gnathostomata Vertebrata No 1
Sha-Mir-23-P3 sha-mir-23a MIR-23 UCACAUU None MIMAT0022786 GL841415.1 820975 821032 + Gnathostomata Vertebrata Yes 1
Sto-Mir-23-P3 None MIR-23 UCACAUU None None BFAA01001728.1 158875 158934 - Gnathostomata Vertebrata No 1
Tgu-Mir-23-P3 None MIR-23 UCACAUU None None 30 3316574 3316636 + Gnathostomata Vertebrata Yes 1
Tni-Mir-23-P3 tni-mir-23a-3 MIR-23 UCACAUU None MIMAT0002913 3 8969974 8970035 + Gnathostomata Vertebrata No
Xtr-Mir-23-P3 xtr-mir-23a-1 MIR-23 UCACAUU None MIMAT0003568 chr3 129998679 129998742 + Gnathostomata Vertebrata No 1 1
Cmi-Mir-23-P3a None MIR-23 UCACAUU None None KI635928.1 353511 353570 + C. milii Vertebrata No 1
Cmi-Mir-23-P3b None MIR-23 UCACAUU None None KI635884.1 1081809 1081868 + C. milii Vertebrata No 1
Xla-Mir-23-P3c xla-mir-23a MIR-23 UCACAUU None MIMAT0011145 NC_030728.1 133946064 133946127 + X. laevis Vertebrata No 1 1
Xla-Mir-23-P3d None MIR-23 UCACAUU None None NW_016694811.1 2508063 2508127 + X. laevis Vertebrata No 1 1
Mun-Mir-23-P3e None MIR-23 UCACAUU None None LR594634.1 194255866 194255925 - M. unicolor Vertebrata No 1
Mun-Mir-23-P3f None MIR-23 UCACAUU None None LR594634.1 194189377 194189436 - M. unicolor Vertebrata No 1
Cmi-Mir-23-P4 None MIR-23 UCACAUU None None KI635918.1 1564922 1564986 + Gnathostomata Vertebrata No 1 1
Lch-Mir-23-P4 None MIR-23 UCACAUU None None JH127091.1 1154085 1154147 - Gnathostomata Vertebrata Unknown
Loc-Mir-23-P4 None MIR-23 UCACAUU None None LG19 5779627 5779689 + Gnathostomata Vertebrata No 1
Sto-Mir-23-P4 None MIR-23 UCACAUU None None BFAA01000014.1 1434855 1434919 + Gnathostomata Vertebrata No 1
Xtr-Mir-23-P4 xtr-mir-23a-2 MIR-23 UCACAUU None MIMAT0003568 chr4 73605123 73605184 + Gnathostomata Vertebrata No 1
Dre-Mir-23-P4a dre-mir-23a-1 MIR-23 UCACAUU None MIMAT0001790 chr22 5293226 5293289 + Clupeocephala Vertebrata No
Gmo-Mir-23-P4a gmo-mir-23a-3 MIR-23 UCACAUU None MIMAT0044005 GeneScaffold_1112 351353 351416 - Clupeocephala Vertebrata No 1
Mal-Mir-23-P4a None MIR-23 UCACAUU None None KV884817.1 553132 553195 - Clupeocephala Vertebrata No
Tni-Mir-23-P4a tni-mir-23a-1 MIR-23 UCACAUU None MIMAT0002913 1 16058804 16058867 + Clupeocephala Vertebrata No
Xla-Mir-23-P4c None MIR-23 UCACAUU None None NC_030730.1 79670452 79670512 - X. laevis Vertebrata No 1
Xla-Mir-23-P4d xla-mir-23a-2 MIR-23 UCACAUU MIMAT0046546 MIMAT0046547 NC_030731.1 64137540 64137600 - X. laevis Vertebrata No
Ebu-Mir-23-P5 None MIR-23 UCACAUU None None FYBX02009499.1 1849196 1849255 - E. burgeri Vertebrata Yes 1 1
Ebu-Mir-23-P6 None MIR-23 UCACAUU None None FYBX02009928.1 2218744 2218804 - E. burgeri Vertebrata Yes 1 1
Dlo-Novel-1 None DLO-NOVEL-1 UCACAUU None None NC_087230.1 10243043 10243098 - D. longicaudata D. longicaudata No 1

(red - mature/co-mature, blue - star)

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