MirGeneDB

MirGeneDB ID

Dno-Mir-23-P2

Family name MIR-23 (all species)
Seed UCACAUU
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-23b
Paralogues Dno-Mir-23-P1 
Orthologues Aca-Mir-23-P2  Ami-Mir-23-P2  Bta-Mir-23-P2  Cfa-Mir-23-P2  Cli-Mir-23-P2  Cpi-Mir-23-P2  Cpo-Mir-23-P2  Dre-Mir-23-P2a  Dre-Mir-23-P2b  Ete-Mir-23-P2  Gga-Mir-23-P2  Hsa-Mir-23-P2  Mdo-Mir-23-P2  Mml-Mir-23-P2  Mmu-Mir-23-P2  Oan-Mir-23-P2  Ocu-Mir-23-P2  Rno-Mir-23-P2  Sha-Mir-23-P2  Sto-Mir-23-o2  Sto-Mir-23-P2  Tgu-Mir-23-P2  Xtr-Mir-23-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(dasNov3)
JH570415: 2090017-2090076 [+] UCSC Ensembl
Clustered MiRNAs
(< 10kb from Mir-23-P2)
Mir-23-P2 JH570415: 2090017-2090076 [+] UCSC Ensembl
Mir-27-P2 JH570415: 2090250-2090312 [+] UCSC Ensembl
Mir-24-P2 JH570415: 2090841-2090900 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUGGUCUGCUCUCCAGUGCUCUGGCUGCUUGGGUUCCUGGCAUGCUGAUUUGUGACUUAAGAUUAAAAUCACAUUGCCAGGGAUUACCACGCAACCACGACCUUGGCUGCACCUCCAGA
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Structure
        10        20         30          40         50         
CCUGGUCUGCUCUCCAGUGC  -   C   U   --         -|  C      GUGACU 
                    UC UGG UGC UGG  GUUCCUGGC AUG UGAUUU      U
                    AG ACC ACG ACC  UAGGGACCG UAC ACUAAA      A
AGACCUCCACGUCGGUUCC-  C   A   C   AU         U^  -      AUUAGA 
.       110        100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
To
Star sequence

Dno-Mir-23-P2_5p*

MirBase accessionMIMAT0047530
Sequence
0- UGGGUUCCUGGCAUGCUGAUUU -22
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Mature sequence

Dno-Mir-23-P2_3p

MirBase accessionMIMAT0047531
Sequence
38- AUCACAUUGCCAGGGAUUACCA -60
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