MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-24-P3

Family name MIR-24 (all species)
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-24-2
Paralogues Rno-Mir-24-P2 
Orthologues Aca-Mir-24-P3  Ami-Mir-24-P3  Bta-Mir-24-P3  Cfa-Mir-24-P3  Cja-Mir-24-P3  Cmi-Mir-24-P3  Cpi-Mir-24-P3  Cpo-Mir-24-P3  Dno-Mir-24-P3  Dre-Mir-24-P3  Eca-Mir-24-P3  Ete-Mir-24-P3  Gga-Mir-24-P3  Gja-Mir-24-P3  Gmo-Mir-24-P3  Hsa-Mir-24-P3  Laf-Mir-24-P3  Lch-Mir-24-P3  Loc-Mir-24-P3  Mdo-Mir-24-P3  Mml-Mir-24-P3  Mmr-Mir-24-P3  Mmu-Mir-24-P3  Mun-Mir-24-P3a  Mun-Mir-24-P3b  Neu-Mir-24-P3  Oan-Mir-24-P3  Ocu-Mir-24-P3  Pab-Mir-24-P3  Pbv-Mir-24-P3  Sha-Mir-24-P3  Sto-Mir-24-P3  Tgu-Mir-24-P3  Tni-Mir-24-P3  Xla-Mir-24-P3c  Xla-Mir-24-P3d  Xtr-Mir-24-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(rn6)		 chr19: 25318887-25318944 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-24-P3)		 Mir-181-P2c chr19: 25290062-25290123 [-] UCSC Ensembl
Mir-181-P1c chr19: 25290233-25290293 [-] UCSC Ensembl
Mir-23-P3 chr19: 25318591-25318649 [+] UCSC Ensembl
Mir-27-P3 chr19: 25318749-25318811 [+] UCSC Ensembl
Mir-24-P3 chr19: 25318887-25318944 [+] UCSC Ensembl
Seed GGCUCAG
Precursor
(pre-Mir +30nt flank)		 
GCAUCUGCCUCUCCCUGGGCUCCGCCUCCUGUGCCUACUGAGCUGAAACAGUUGAUUCCAGUGCACUGGCUCAGUUCAGCAGGAACAGGAGUCCAGCCCCCAUAGGAGCUGGCAACCC
Get precursor sequence
Structure
        10           20        30        40        50        
GCAUCUGCCUCUCCCUG---|   CCGC       G   A         AA    UGAUU 
                    GGCU    CUCCUGU CCU CUGAGCUGA  CAGU     C
                    CCGA    GAGGACA GGA GACUUGACU  GUCA     C
CCCAACGGUCGAGGAUACCC^   CCU-       A   C         CG    CGUGA 
      110       100         90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsNo
Tissue expression
- +
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Star sequence

Rno-Mir-24-P3_5p*
mirBase accessionMIMAT0005441
Sequence 
0- GUGCCUACUGAGCUGAAACAGU -22
Get sequence
Proposed targets microrna.org: MIMAT0005441
TargetScanVert: rno-miR-24-2-5p
miRDB: MIMAT0005441
Mature sequence

Rno-Mir-24-P3_3p
mirBase accessionMIMAT0000794
Sequence 
36- UGGCUCAGUUCAGCAGGAACAG -58
Get sequence
Proposed targets microrna.org: MIMAT0000794
TargetScanVert: rno-miR-24-3p
miRDB: MIMAT0000794