Mir-24-P3

MirGeneDB ID

Hsa-Mir-24-P3

Family name

MIR-24 (all species)

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-24-2

Paralogues

Hsa-Mir-24-P2

Orthologues

Aca-Mir-24-P3 Ami-Mir-24-P3 Bta-Mir-24-P3 Cfa-Mir-24-P3 Cja-Mir-24-P3 Cmi-Mir-24-P3 Cpi-Mir-24-P3 Cpo-Mir-24-P3 Dno-Mir-24-P3 Dre-Mir-24-P3 Eca-Mir-24-P3 Ete-Mir-24-P3 Gga-Mir-24-P3 Gja-Mir-24-P3 Gmo-Mir-24-P3 Laf-Mir-24-P3 Lch-Mir-24-P3 Loc-Mir-24-P3 Mdo-Mir-24-P3 Mml-Mir-24-P3 Mmr-Mir-24-P3 Mmu-Mir-24-P3 Mun-Mir-24-P3a Mun-Mir-24-P3b Neu-Mir-24-P3 Oan-Mir-24-P3 Ocu-Mir-24-P3 Pab-Mir-24-P3 Pbv-Mir-24-P3 Rno-Mir-24-P3 Sha-Mir-24-P3 Sto-Mir-24-P3 Tgu-Mir-24-P3 Tni-Mir-24-P3 Xla-Mir-24-P3c Xla-Mir-24-P3d Xtr-Mir-24-P3

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Vertebrata

Genome context
(hg38)

chr19: 13836289-13836348 [-] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-24-P3)

Mir-24-P3 chr19: 13836289-13836348 [-] UCSC Ensembl
Mir-27-P3 chr19: 13836447-13836508 [-] UCSC Ensembl
Mir-23-P3 chr19: 13836593-13836651 [-] UCSC Ensembl
Mir-181-P1c chr19: 13874725-13874785 [+] UCSC Ensembl
Mir-181-P2c chr19: 13874910-13874972 [+] UCSC Ensembl

Seed

GGCUCAG

Precursor
(pre-Mir +30nt flank)

GCUGCCUGGCCUCCCUGGGCUCUGCCUCCCGUGCCUACUGAGCUGAAACACAGUUGGUUUGUGUACACUGGCUCAGUUCAGCAGGAACAGGGGUCAAGCCCCCUUGGAGCCUGCAGCCCC

Get precursor sequence

Structure

        10           20        30        40        50        60
GCUGCCUGGCCUCCCUG---|   CU   U  C  G   A         AACA    UGGUU 
                    GGCU  GCC CC GU CCU CUGAGCUGA    CAGU     U
                    CCGA  UGG GG CA GGA GACUUGACU    GUCA     G
CCCCGACGUCCGAGGUUCCC^   AC   -  A  A   C         CG--    CAUGU 
.       110       100         90        80          70

Deep sequencing

Go to detailed chart

3' NTU

Yes

Motifs

Tissue expression

Dc	Dc	Dr	Dr	Xp	Xp	Bl	Br	Br	Ce	Ce	Co	Fo	He	Ki	Le	Li	Li	Lu	Pa	Pl	Pl	Sk	Sk	Sk	Sm	Sp	Sp	St	Te	Th	Ut

Star sequence

Hsa-Mir-24-P3_5p*

mirBase accession

MIMAT0004497

Sequence

0- GUGCCUACUGAGCUGAAACACAGU -24

Get sequence

Proposed targets

microrna.org: MIMAT0004497
TargetScanVert: hsa-miR-24-2-5p
TargetMiner: hsa-miR-24-2-5p
miRDB: MIMAT0004497

Mature sequence

Hsa-Mir-24-P3_3p

mirBase accession

MIMAT0000080

Sequence

38- UGGCUCAGUUCAGCAGGAACAG -60

Get sequence

Proposed targets

microrna.org: MIMAT0000080
TargetScanVert: hsa-miR-24-3p
TargetMiner: hsa-miR-24-3p
miRDB: MIMAT0000080