MirGeneDB 3.0
MirGeneDB ID

Gga-Mir-24-P3

Family name MIR-24 (all species)
Species Chicken (Gallus gallus)
MiRBase ID
Paralogues Gga-Mir-24-P2 
Orthologues Aca-Mir-24-P3  Ami-Mir-24-P3  Bta-Mir-24-P3  Cfa-Mir-24-P3  Cja-Mir-24-P3  Cmi-Mir-24-P3  Cpi-Mir-24-P3  Cpo-Mir-24-P3  Dno-Mir-24-P3  Dre-Mir-24-P3  Eca-Mir-24-P3  Ete-Mir-24-P3  Gja-Mir-24-P3  Gmo-Mir-24-P3  Hsa-Mir-24-P3  Laf-Mir-24-P3  Lch-Mir-24-P3  Loc-Mir-24-P3  Mdo-Mir-24-P3  Mml-Mir-24-P3  Mmr-Mir-24-P3  Mmu-Mir-24-P3  Mun-Mir-24-P3a  Mun-Mir-24-P3b  Neu-Mir-24-P3  Oan-Mir-24-P3  Ocu-Mir-24-P3  Pab-Mir-24-P3  Pbv-Mir-24-P3  Rno-Mir-24-P3  Sha-Mir-24-P3  Sto-Mir-24-P3  Tgu-Mir-24-P3  Tni-Mir-24-P3  Xla-Mir-24-P3c  Xla-Mir-24-P3d  Xtr-Mir-24-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(Gallus_gallus.GRCg6a)		 30: 1398627-1398686 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-24-P3)		 Mir-27-P3 30: 1398469-1398524 [+] UCSC Ensembl
Mir-24-P3 30: 1398627-1398686 [+] UCSC Ensembl
Seed GGCUCAG
Precursor
(pre-Mir +30nt flank)		 
CCCCCCCCCCCCCACCCGGCGCCGCCCCCGGUGCCUACUGAGCUGACACGCAGUCGUUGGUCGCACACUGGCUCAGUUCAGCAGGAACAGGGGUCUGCGCCGCCGCCGCCGCACCGGGAC
Get precursor sequence
Structure
        10          20         30        40        50        60
CCCCCCCCCCCCCACCC--     C-|    CG  G   A         CACG    CGUUG 
                   GGCGC  GCCCC  GU CCU CUGAGCUGA    CAGU     G
                   CCGCG  UGGGG  CA GGA GACUUGACU    GUCA     U
CAGGGCCACGCCGCCGCCG     UC^    A-  A   C         CG--    CACGC 
.       110       100        90         80          70
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Star sequence

Gga-Mir-24-P3_5p*
mirBase accessionNone
Sequence 
0- GUGCCUACUGAGCUGACACGCAGU -24
Get sequence
Mature sequence

Gga-Mir-24-P3_3p
mirBase accessionNone
Sequence 
38- UGGCUCAGUUCAGCAGGAACAG -60
Get sequence