MirGeneDB 3.0
MirGeneDB ID

Gga-Mir-27-P3

Family name MIR-27 (all species)
Species Chicken (Gallus gallus)
MiRBase ID
Paralogues Gga-Mir-27-P2 
Orthologues Aca-Mir-27-P3  Ami-Mir-27-P3  Bta-Mir-27-P3  Cfa-Mir-27-P3  Cja-Mir-27-P3  Cmi-Mir-27-P3  Cpi-Mir-27-P3  Cpo-Mir-27-P3  Dno-Mir-27-P3  Dre-Mir-27-P3  Eca-Mir-27-P3  Ete-Mir-27-P3  Gja-Mir-27-P3  Gmo-Mir-27-P3  Hsa-Mir-27-P3  Laf-Mir-27-P3  Lch-Mir-27-P3  Loc-Mir-27-P3  Mal-Mir-27-P3  Mdo-Mir-27-P3  Mml-Mir-27-P3  Mmr-Mir-27-P3  Mmu-Mir-27-P3  Neu-Mir-27-P3  Oan-Mir-27-P3  Ocu-Mir-27-P3  Pab-Mir-27-P3  Pbv-Mir-27-P3  Rno-Mir-27-P3  Sha-Mir-27-P3  Sto-Mir-27-P3a  Sto-Mir-27-P3b  Tgu-Mir-27-P3  Tni-Mir-27-P3  Xla-Mir-27-P3c  Xla-Mir-27-P3d  Xtr-Mir-27-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(Gallus_gallus.GRCg6a)		 30: 1398469-1398524 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-27-P3)		 Mir-27-P3 30: 1398469-1398524 [+] UCSC Ensembl
Mir-24-P3 30: 1398627-1398686 [+] UCSC Ensembl
Seed UCACAGU
Precursor
(pre-Mir +30nt flank)		 
GACAGCGGCUGAGCUGAGGCCCCGUGGCGCAGGGCUUGGCGCAGCUGUGAACAGAGCCCGUCGUGUUCACAGUGGCUAAGUUCCGCGCCCCGGGGACCCCCCCUUAAGGACCCCCA
Get precursor sequence
Structure
        10          20        30        40        50        
GACAGCGGCUGAGCUGA-  -|    U     A         G  G         GAGC 
                  GG CCCCG GGCGC GGGCUUGGC CA CUGUGAACA    C
                  CC GGGGC CCGCG CUUGAAUCG GU GACACUUGU    C
ACCCCCAGGAAUUCCCCC  A^    C     C         -  -         GCUG 
    110       100        90        80          70        60
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsNo
Tissue expression
- +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Star sequence

Gga-Mir-27-P3_5p*
mirBase accessionNone
Sequence 
0- AGGGCUUGGCGCAGCUGUGAACA -23
Get sequence
Mature sequence

Gga-Mir-27-P3_3p
mirBase accessionNone
Sequence 
35- UUCACAGUGGCUAAGUUCCGC -56
Get sequence