MirGeneDB 3.0
MirGeneDB ID

Aca-Mir-27-P3

Family name MIR-27 (all species)
Species Green anole lizard (Anolis carolinensis)
MiRBase ID aca-mir-27a
Paralogues Aca-Mir-27-P2 
Orthologues Ami-Mir-27-P3  Bta-Mir-27-P3  Cfa-Mir-27-P3  Cja-Mir-27-P3  Cmi-Mir-27-P3  Cpi-Mir-27-P3  Cpo-Mir-27-P3  Dno-Mir-27-P3  Dre-Mir-27-P3  Eca-Mir-27-P3  Ete-Mir-27-P3  Gga-Mir-27-P3  Gja-Mir-27-P3  Gmo-Mir-27-P3  Hsa-Mir-27-P3  Laf-Mir-27-P3  Lch-Mir-27-P3  Loc-Mir-27-P3  Mal-Mir-27-P3  Mdo-Mir-27-P3  Mml-Mir-27-P3  Mmr-Mir-27-P3  Mmu-Mir-27-P3  Neu-Mir-27-P3  Oan-Mir-27-P3  Ocu-Mir-27-P3  Pab-Mir-27-P3  Pbv-Mir-27-P3  Rno-Mir-27-P3  Sha-Mir-27-P3  Sto-Mir-27-P3a  Sto-Mir-27-P3b  Tgu-Mir-27-P3  Tni-Mir-27-P3  Xla-Mir-27-P3c  Xla-Mir-27-P3d  Xtr-Mir-27-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(anoCar2)		 2: 29157937-29157998 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-27-P3)		 Mir-24-P3 2: 29157652-29157711 [-] UCSC Ensembl
Mir-27-P3 2: 29157937-29157998 [-] UCSC Ensembl
Mir-23-P3 2: 29158348-29158408 [-] UCSC Ensembl
Seed UCACAGU
Precursor
(pre-Mir +30nt flank)		 
GGAAAGGCCUUUUUUCAGAUGACAAGCCGUAGGGCUUAGCCCACCUGUGAACAGCAUUGGAUUCAGCCAUGUUCACAGUGGCUAAGUUCCGCUGCUUGGAGUUCAUUAUCUUCACACCAAAU
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Structure
        10          20        30        40        50        60 
GGAAAGGCCUUUUUUCA--|  GA     C UA          CAC         GCAUUGG 
                   GAU  CAAGC G  GGGCUUAGCC   CUGUGAACA       A
                   UUG  GUUCG C  CUUGAAUCGG   GACACUUGU       U
UAAACCACACUUCUAUUAC^  AG     U GC          U--         ACCGACU 
120       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Sk Ta Ta To Wh
Star sequence

Aca-Mir-27-P3_5p*
mirBase accessionMIMAT0021905
Sequence 
0- AGGGCUUAGCCCACCUGUGAACA -23
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Mature sequence

Aca-Mir-27-P3_3p
mirBase accessionMIMAT0021906
Sequence 
41- UUCACAGUGGCUAAGUUCCGC -62
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