MirGeneDB

45 microRNA genes with seed UCACAGU
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Sto-Mir-27-o1 None MIR-27 AGAACUU None None BFAA01000014.1 1438467 1438532 + S. torazame Vertebrata No
Aca-Mir-27-P1 aca-mir-27a MIR-27 UCACAGU MIMAT0021905 MIMAT0021906 2 29157937 29157998 - Vertebrata Vertebrata No 1
Ami-Mir-27-P1 ami-mir-27a MIR-27 UCACAGU MIMAT0038067 MIMAT0038068 JH732793 220504 220566 + Vertebrata Vertebrata No 1
Bta-Mir-27-P1 bta-mir-27a MIR-27 UCACAGU MIMAT0012532 MIMAT0003532 chr7 12981795 12981855 - Vertebrata Vertebrata No 1
Cfa-Mir-27-P1 cfa-mir-27a MIR-27 UCACAGU None MIMAT0006641 chr20 48620555 48620616 + Vertebrata Vertebrata No 1
Cpi-Mir-27-P1 cpi-mir-27a MIR-27 UCACAGU MIMAT0037664 MIMAT0037665 JH584948 868327 868390 - Vertebrata Vertebrata No
Cpo-Mir-27-P1 cpo-mir-27a MIR-27 UCACAGU MIMAT0046890 MIMAT0046891 scaffold_42 12931848 12931908 + Vertebrata Vertebrata No 1
Dno-Mir-27-P1 dno-mir-27a MIR-27 UCACAGU MIMAT0047543 MIMAT0047544 AAGV03195862 315 376 + Vertebrata Vertebrata No 1
Dre-Mir-27-P1 dre-mir-27c MIR-27 UCACAGU MIMAT0003401 MIMAT0001798 chr3 13406464 13406527 + Vertebrata Vertebrata No 1
Ete-Mir-27-P1 None MIR-27 UCACAGU None None JH980397 3706321 3706382 + Vertebrata Vertebrata No 1
Hsa-Mir-27-P1 hsa-mir-27a MIR-27 UCACAGU MIMAT0004501 MIMAT0000084 chr19 13836447 13836508 - Vertebrata Vertebrata No 1
Mdo-Mir-27-P1 mdo-mir-27a MIR-27 UCACAGU MIMAT0026711 MIMAT0004174 3 446526008 446526070 + Vertebrata Vertebrata No
Mml-Mir-27-P1 mml-mir-27a MIR-27 UCACAGU MIMAT0026600 MIMAT0002753 chr19 13839020 13839081 - Vertebrata Vertebrata No 1
Mmu-Mir-27-P1 mmu-mir-27a MIR-27 UCACAGU MIMAT0004633 MIMAT0000537 chr8 84208685 84208747 + Vertebrata Vertebrata No 1
Oan-Mir-27-P1 oan-mir-27a MIR-27 UCACAGU MIMAT0007062 MIMAT0007063 Oan-Mir-24_27-P1_KAAE-cwe25b12 162 221 + Vertebrata Vertebrata No 1 1
Rno-Mir-27-P1 rno-mir-27a MIR-27 UCACAGU MIMAT0004715 MIMAT0000799 chr19 25318749 25318811 + Vertebrata Vertebrata No 1
Sha-Mir-27-P1 None MIR-27 UCACAGU None None GL841415.1 821157 821219 + Vertebrata Vertebrata No
Sto-Mir-27-P1 None MIR-27 GGACUUA None None BFAA01001728.1 154600 154664 - Vertebrata Vertebrata No
Tgu-Mir-27-P1 None MIR-27 UCACAGU None None gnl|ti|1397907006 344 404 - Vertebrata Vertebrata No
Xtr-Mir-27-P1 xtr-mir-27a MIR-27 UCACAGU None MIMAT0003570 KB021698 52053 52114 + Vertebrata Vertebrata No 1
Aca-Mir-27-P2 aca-mir-27b MIR-27 UCACAGU MIMAT0021907 MIMAT0021908 2 40591779 40591841 - Vertebrata Vertebrata No 1
Ami-Mir-27-P2 ami-mir-27b MIR-27 UCACAGU MIMAT0038069 MIMAT0038070 JH734258 394776 394838 + Vertebrata Vertebrata No
Bta-Mir-27-P2 bta-mir-27b MIR-27 UCACAGU None MIMAT0003546 chr8 83009841 83009903 + Vertebrata Vertebrata No 1
Cfa-Mir-27-P2 cfa-mir-27b MIR-27 UCACAGU None MIMAT0006613 chr1 71678117 71678179 - Vertebrata Vertebrata No 1
Cli-Mir-27-P2 cli-mir-27b MIR-27 UCACAGU MIMAT0038445 MIMAT0038446 scaffold226 157004 157066 + Vertebrata Vertebrata No 1
Cpi-Mir-27-P2 cpi-mir-27b MIR-27 UCACAGU MIMAT0037666 MIMAT0037667 JH584764 1108949 1109011 - Vertebrata Vertebrata No 1
Cpo-Mir-27-P2 cpo-mir-27b MIR-27 UCACAGU MIMAT0046892 MIMAT0046893 scaffold_42 4055574 4055636 - Vertebrata Vertebrata No 1
Dno-Mir-27-P2 dno-mir-27b MIR-27 UCACAGU MIMAT0047545 MIMAT0047546 JH570415 2090250 2090312 + Vertebrata Vertebrata No 1
Ete-Mir-27-P2 None MIR-27 UCACAGU None None JH980384 3445414 3445476 - Vertebrata Vertebrata No 1
Gga-Mir-27-P2 gga-mir-27b MIR-27 UCACAGU MIMAT0026547 MIMAT0001187 Z 41649420 41649482 + Vertebrata Vertebrata No 1
Hsa-Mir-27-P2 hsa-mir-27b MIR-27 UCACAGU MIMAT0004588 MIMAT0000419 chr9 95085463 95085525 + Vertebrata Vertebrata No 1
Mdo-Mir-27-P2 mdo-mir-27b MIR-27 UCACAGU MIMAT0026714 MIMAT0004177 6 17696108 17696170 + Vertebrata Vertebrata No
Mml-Mir-27-P2 mml-mir-27b MIR-27 UCACAGU MIMAT0026802 MIMAT0006167 chr15 108904322 108904384 + Vertebrata Vertebrata No 1
Mmu-Mir-27-P2 mmu-mir-27b MIR-27 UCACAGU MIMAT0004522 MIMAT0000126 chr13 63300718 63300780 + Vertebrata Vertebrata No 1
Oan-Mir-27-P2 oan-mir-27b MIR-27 UCACAGU MIMAT0006956 MIMAT0006957 NC_041753.1 69581278 69581340 + Vertebrata Vertebrata No
Ocu-Mir-27-P2 ocu-mir-27b MIR-27 UCACAGU MIMAT0048139 MIMAT0048140 chr1 74102379 74102441 + Vertebrata Vertebrata No 1
Rno-Mir-27-P2 rno-mir-27b MIR-27 UCACAGU MIMAT0017101 MIMAT0000798 chr17 823479 823541 + Vertebrata Vertebrata No 1
Sha-Mir-27-P2 sha-mir-27b MIR-27 UCACAGU None MIMAT0022789 GL841474.1 1160088 1160150 + Vertebrata Vertebrata No
Sto-Mir-27-P2 None MIR-27 UCACAGU None None BFAA01002700.1 246153 246216 - Vertebrata Vertebrata No 1
Tgu-Mir-27-P2 tgu-mir-27 MIR-27 UCACAGU MIMAT0026991 MIMAT0014534 Z 9900334 9900396 - Vertebrata Vertebrata No 1
Xtr-Mir-27-P2 xtr-mir-27b MIR-27 UCACAGU None MIMAT0003571 KB021649 90035317 90035379 - Vertebrata Vertebrata No 1
Dre-Mir-27-P2a dre-mir-27d MIR-27 UCACAGU None MIMAT0001799 chr10 15954740 15954804 + D. rerio Vertebrata No
Dre-Mir-27-P2b dre-mir-27b MIR-27 UCACAGU MIMAT0031950 MIMAT0001797 chr8 30167449 30167508 - D. rerio Vertebrata No 1
Dre-Mir-27-P3 dre-mir-27e MIR-27 UCACAGU None MIMAT0001800 chr22 5299972 5300035 + Vertebrata Vertebrata No
Dre-Mir-27-P4 dre-mir-27a MIR-27 UCACAGU MIMAT0031949 MIMAT0001796 chr2 33902361 33902423 + Vertebrata Vertebrata No

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