MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-27-P4b

Family name MIR-27 (all species)
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-27-P1  Mal-Mir-27-P2a  Mal-Mir-27-P2b  Mal-Mir-27-P3  Mal-Mir-27-P4a 
Orthologues Cmi-Mir-27-P4  Gmo-Mir-27-P4b  Lch-Mir-27-P4  Loc-Mir-27-P4  Sto-Mir-27-P4  Tni-Mir-27-P4b  Xtr-Mir-27-P4 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884702.1: 2269816-2269878 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-27-P4b)		 Mir-27-P4b KV884702.1: 2269816-2269878 [+] UCSC Ensembl
Mir-24-P4b KV884702.1: 2270202-2270261 [+] UCSC Ensembl
Seed UCACAGU
Precursor
(pre-Mir +30nt flank)		 
UUCCUUCUGAGAUGACUUUUCUAAAGAUGCAGAGCUUAGCUCAUUAGUGAGCAUUGAACCAAACAGGAAUUGUUCACAGUGGCUAAGUUCAGUGUCUGACAUGAAAGAAUGAGCUGCCCACGU
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Structure
        10        20          30        40        50        60  
UUCCUUCUGAGAUGACUU   UAA--|     A         U    A      AUUGAACCA 
                  UUC     AGAUGC GAGCUUAGC CAUU GUGAGC         \
                  AAG     UCUGUG CUUGAAUCG GUGA CACUUG         A
UGCACCCGUCGAGUAAGA   UACAG^     A         -    -      UUAAGGACA 
 120       110       100        90         80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Fe Fe In Ma Ma
Star sequence

Mal-Mir-27-P4b_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGAGCUUAGCUCAUUAGUGAGC -22
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Mature sequence

Mal-Mir-27-P4b_3p
mirBase accessionNone
Sequence 
42- UUCACAGUGGCUAAGUUCAGU -63
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