MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-27-P2

Family name MIR-27 (all species)
Species Horse (Equus caballus)
MiRBase ID eca-mir-27b
Paralogues Eca-Mir-27-P3 
Orthologues Aca-Mir-27-P2  Ami-Mir-27-P2  Bta-Mir-27-P2  Cfa-Mir-27-P2  Cja-Mir-27-P2  Cli-Mir-27-P2  Cmi-Mir-27-P2  Cpi-Mir-27-P2  Cpo-Mir-27-P2  Dno-Mir-27-P2  Dre-Mir-27-P2a  Dre-Mir-27-P2b  Ete-Mir-27-P2  Gga-Mir-27-P2  Gja-Mir-27-P2  Gmo-Mir-27-P2b  Hsa-Mir-27-P2  Laf-Mir-27-P2  Lch-Mir-27-P2  Loc-Mir-27-P2  Mal-Mir-27-P2a  Mal-Mir-27-P2b  Mdo-Mir-27-P2  Mml-Mir-27-P2  Mmr-Mir-27-P2  Mmu-Mir-27-P2  Mun-Mir-27-P2  Neu-Mir-27-P2  Oan-Mir-27-P2  Ocu-Mir-27-P2  Pab-Mir-27-P2  Pbv-Mir-27-P2  Pma-Mir-27-o2  Rno-Mir-27-P2  Sha-Mir-27-P2  Spt-Mir-27-P2  Sto-Mir-27-P2  Tgu-Mir-27-P2  Tni-Mir-27-P2b  Xla-Mir-27-P2c  Xla-Mir-27-P2d  Xtr-Mir-27-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009170.1: 2132387-2132449 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-27-P2)		 Mir-24-P2 CM009170.1: 2131867-2131926 [-] UCSC Ensembl
Mir-27-P2 CM009170.1: 2132387-2132449 [-] UCSC Ensembl
Mir-23-P2 CM009170.1: 2132617-2132676 [-] UCSC Ensembl
Seed UCACAGU
Precursor
(pre-Mir +30nt flank)		 
UGCCCAGCGACGACCUCUCUGACGAGGUGCAGAGCUUAGCUGAUUGGUGAACAGUGACUGGUUUCCGCUUUGUUCACAGUGGCUAAGUUCUGCACCUGAAGAGAAGGUGAGAUGGGGACAGUU
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Structure
        10            20        30        40        50        60  
UGCCCAGCGACGACCUC----|  GACG                  AUUG       GUGACUGG 
                     UCU    AGGUGCAGAGCUUAGCUG    GUGAACA        \
                     AGA    UCCACGUCUUGAAUCGGU    CACUUGU        U
UUGACAGGGGUAGAGUGGAAG^  AG--                  GA--       UUCGCCUU 
 120       110       100          90        80          70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
- +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Star sequence

Eca-Mir-27-P2_5p*
mirBase accessionNone
Sequence 
0- AGAGCUUAGCUGAUUGGUGAACA -23
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Mature sequence

Eca-Mir-27-P2_3p
mirBase accessionMIMAT0013114
Sequence 
42- UUCACAGUGGCUAAGUUCUGC -63
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